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Implementing molecular dynamics on hybrid high performance computers – short range forces

W. Michael Brown, Peng Wang, Steven J. Plimpton, Arnold N. Tharrington

Tags: Chemistry, CUDA, GPU cluster, Molecular dynamics, nVidia, Physics

January 22, 2011 by hgpu

Swan: A tool for porting CUDA programs to OpenCL

M. J. Harvey, G. De Fabritiis

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Tags: Compilers, Computer science, CUDA, nVidia, OpenCL, Package, Tesla C1060

January 22, 2011 by hgpu

A parallel evolutionary algorithm to optimize dynamic memory managers in embedded systems

Jose L. Risco-Martin, David Atienza, J. Manuel Colmenar and Oscar Garnica

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Tags: Algorithms, Computer science, Genetic programming, Memory model

January 22, 2011 by hgpu

Porting estimation of distribution algorithms to the cell broadband engine

Carlos Perez-Miguel, Jose Miguel-Alonso, Alexander Mendiburu

Tags: Algorithms, Computer science, Genetic programming, Playstation

January 22, 2011 by hgpu

Evolving Soft Robotic Locomotion in PhysX

John Rieffel, Frank Saunders, Shilpa Nadimpalli, Harvey Zhou, Soha Hassoun, Jason Rife, Barry Trimmer

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Tags: Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce 9800 GT

January 22, 2011 by hgpu

Evaluating the cell broadband engine as a platform to run estimation of distribution algorithms

Carlos Perez-Miguel, Jose Miguel-Alonso and Alexander Mendiburu

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Tags: Algorithms, Computer science, Genetic programming, Playstation

January 22, 2011 by hgpu

Strategies to minimise the total run time of cyclic graph based genetic programming with GPUs

Tony E. Lewis, George D. Magoulas

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Tags: Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce 8800 GT, Programming techniques

January 22, 2011 by hgpu

Distributed genetic programming on GPUs using CUDA

Simon Harding, Wolfgang Banzhaf

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Tags: Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce 8200, Programming techniques, Tutorial

January 22, 2011 by hgpu

Improving SMT performance: an application of genetic algorithms to configure resizable caches

Josefa Diaz, J. Ignacio Hidalgo, Francisco Fernandez, Oscar Garnica, Sonia Lopez

Tags: Artificial intelligence, Computer science, Genetic programming

January 22, 2011 by hgpu

Accelerating evolutionary computation with graphics processing units

Wolfgang Banzhaf, Simon Harding

Tags: Algorithms, Computer science, Genetic programming, Programming techniques, Tutorial

January 22, 2011 by hgpu

Parallel genetic algorithm on the CUDA architecture

Petr Pospichal, Jiri Jaros and Josef Schwarz

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Tags: Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce GTX 285

January 22, 2011 by hgpu

Parallel Genetic Algorithm Solving 0/1 Knapsack Problem Running on the GPU

Petr Pospichal, Josef Schwarz and Jiri Jaros

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Tags: Computer science, CUDA, Genetic programming, nVidia, nVidia GeForce GTX 260

January 22, 2011 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

Implementing molecular dynamics on hybrid high performance computers – short range forces

Swan: A tool for porting CUDA programs to OpenCL

A parallel evolutionary algorithm to optimize dynamic memory managers in embedded systems

Porting estimation of distribution algorithms to the cell broadband engine

Evolving Soft Robotic Locomotion in PhysX

Evaluating the cell broadband engine as a platform to run estimation of distribution algorithms

Strategies to minimise the total run time of cyclic graph based genetic programming with GPUs

Distributed genetic programming on GPUs using CUDA

Improving SMT performance: an application of genetic algorithms to configure resizable caches

Accelerating evolutionary computation with graphics processing units

Parallel genetic algorithm on the CUDA architecture

Parallel Genetic Algorithm Solving 0/1 Knapsack Problem Running on the GPU

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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