high performance computing on graphics processing units: hgpu.org

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Cudagrind: A Valgrind Extension for CUDA

Thomas M. Baumann, Jose Gracia

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Tags: Computer science, CUDA, Memory, nVidia, Package, Software Engineering

October 4, 2013 by hgpu

Template Library for Multi-GPU Pseudorandom Number Recursion-based Generators

Dominik Szalkowski, Przemyslaw Stpiczynski

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Tags: Algorithms, Computer science, CUDA, nVidia, Package, Pseudo-random number generators, Tesla M2050

October 1, 2013 by hgpu

Improving Resource Utilization in Heterogeneous CPU-GPU Systems

Michael Boyer

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Tags: Algorithms, ATI, ATI Radeon HD 5870, ATI Radeon HD 7970, Biology, Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 280, OpenCL, Package, Software Engineering, Thesis

September 23, 2013 by hgpu

Sparse Matrix Algorithms Using GPGPU

Kaupo Kuresson

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Tags: Algorithms, ATI, ATI Radeon HD 5870, Computer science, nVidia, OpenCL, Package, Sparse matrix, Tesla S1070, Tesla T10, Thesis

September 18, 2013 by hgpu

Kokkos: Enabling performance portability across manycore architectures

H. Carter Edwards, Christian R. Trott

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Tags: Code generation, Computer science, CUDA, Intel Phi, Molecular dynamics, nVidia, Package, Tesla K20

September 17, 2013 by hgpu

Parallel Computing Methods For Particle Accelerator Design

Diana Andreea Popescu

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Tags: Algorithms, CUDA, High Energy Physics - Experiment, nVidia, nVidia Quadro K 2000, OpenMP, Package, Physics, Tesla K20, Thesis

September 17, 2013 by hgpu

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Christopher D. Cooper, Jaydeep P. Bardhan, L. A. Barba

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Tags: Biomolecules, Boltzmann equation, Computational Physics, CUDA, Electrostatics, Intel Phi, nVidia, Package, Physics, Poisson Boltzmann, Python, Tesla C2075

September 17, 2013 by hgpu

Expressed Sequence Tag Clustering using Commercial Gaming Hardware

Charl van Deventer, Willem A. Clarke, Scott Hazelhurst

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Tags: Algorithms, Bioinformatics, Clustering, Computer science, CUDA, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 480, Package, Thesis

September 15, 2013 by hgpu

A Novel CPU/GPU Simulation Environment for Large-Scale Biologically-Realistic Neural Modeling

Roger V. Hoang, Devyani Tanna, Laurence C. Jayet Bray, Sergiu M. Dascalu, Frederick C. Harris Jr.

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Tags: Biology, CUDA, Neural networks, Neuroscience, nVidia, nVidia GeForce GTX 460, nVidia GeForce GTX 480, nVidia GeForce GTX 680, Package, Tesla C2050

September 14, 2013 by hgpu

FuzzyGPU: a fuzzy arithmetic library for GPU

David Defour, Manuel Marin

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 480, nVidia GeForce GTX 680, Package

September 13, 2013 by hgpu

Recent progress and challenges in exploiting graphics processors in computational fluid dynamics

Kyle E Niemeyer, Chih-Jen Sung

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Tags: Algorithms, Computational Physics, CUDA, Fluid dynamics, Lattice Boltzmann model, Navier-Stokes equations, NSEs, nVidia, OpenACC, Package, Review, Tesla C2075

September 13, 2013 by hgpu

The discrete dipole approximation code DDscat.C++: features, limitations and plans

V. Ya. Choliy

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Tags: Astrophysics, CUDA, Fortran, nVidia, nVidia GeForce GTX 260, Package

September 4, 2013 by hgpu

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

BoltzGen:Toward Universal Binder Design

CUDA-L2: Surpassing cuBLAS Performance for Matrix Multiplication through Reinforcement Learning

cuPilot: A Strategy-Coordinated Multi-agent Framework for CUDA Kernel Evolution

MATLAB Tensor Core models

Accurate Models of NVIDIA Tensor Cores

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high performance computing on graphics processing units: hgpu.org

Packages

Cudagrind: A Valgrind Extension for CUDA

Template Library for Multi-GPU Pseudorandom Number Recursion-based Generators

Improving Resource Utilization in Heterogeneous CPU-GPU Systems

Sparse Matrix Algorithms Using GPGPU

Kokkos: Enabling performance portability across manycore architectures

Parallel Computing Methods For Particle Accelerator Design

A biomolecular electrostatics solver using Python, GPUs and boundary elements that can handle solvent-filled cavities and Stern layers

Expressed Sequence Tag Clustering using Commercial Gaming Hardware

A Novel CPU/GPU Simulation Environment for Large-Scale Biologically-Realistic Neural Modeling

FuzzyGPU: a fuzzy arithmetic library for GPU

Recent progress and challenges in exploiting graphics processors in computational fluid dynamics

The discrete dipole approximation code DDscat.C++: features, limitations and plans

Recent source codes

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

BoltzGen:Toward Universal Binder Design

CUDA-L2: Surpassing cuBLAS Performance for Matrix Multiplication through Reinforcement Learning

cuPilot: A Strategy-Coordinated Multi-agent Framework for CUDA Kernel Evolution

MATLAB Tensor Core models

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