high performance computing on graphics processing units: hgpu.org

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Performance Efficient DNA Sequence Detection on GPU Using Parallel Pattern Matching Approach

Rahul Shirude, Valmik B. Nikam, B.B. Meshram

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX Titan, RNA, Sequence alignment, String matching, Tesla K20

July 26, 2014 by hgpu

ReGen: Optimizing Genetic Selection Algorithms for Heterogeneous Computing

Scott Kenneth Winkleblack

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Tags: Computer science, CUDA, Genetic programming, Heterogeneous systems, nVidia, Tesla K20, Tesla K40, Thesis

July 26, 2014 by hgpu

Parallel solutions of static Hamilton-Jacobi equations for simulations of geological folds

Tor Gillberg, Are Magnus Bruaset, Oyvind Hjelle, Mohammed Sourouri

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Tags: Algorithms, CUDA, Mathematics, nVidia, OpenMP, Tesla K20

July 26, 2014 by hgpu

ADHA: Automatic Data layout framework for Heterogeneous Architectures

Deepak Majeti, Kuldeep S. Meel, Rajkishore Barik, Vivek Sarkar

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Tags: Benchmarking, Compilers, Computer science, Heterogeneous systems, nVidia, OpenCL, Programming Languages, Tesla M2050

July 24, 2014 by hgpu

Multi-Core Programming Design Patterns: Stream Processing Algorithms for Dynamic Scene Perceptions

Kannappan Palaniappan

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Tags: Algorithms, Benchmarking, Cell processor, Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 460, Tesla C2070

July 24, 2014 by hgpu

Abstraction and Implementation of Unstructured Grid Algorithms on Massively Parallel Heterogeneous Architectures

Istvan Zoltan Reguly

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Tags: Algorithms, Code generation, Computer science, CUDA, Differential equations, FEM, Finite element method, Finite volume method, Fluid dynamics, Heterogeneous systems, Linear Algebra, nVidia, Partial differential equations, PDEs, Programming techniques, Tesla C2070, Tesla K20, Tesla K40, Thesis

July 24, 2014 by hgpu

Electromagnetic Computation and Visualization of Transmission Particle Model and its Simulation Based on GPU

Yingnian Wu, Lin Zhang, Lan Mu

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Tags: Algorithms, CUDA, Electrodynamics, FDTD, nVidia, Raytracing, Visualization

July 24, 2014 by hgpu

Solution Level Parallelization of Local Search Metaheuristic Algorithm on GPU

S. V. Ghorpade, S. M. Kamalapur

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Tags: Algorithms, Computer science, CUDA, Data parallelism, Metaheuristics, nVidia, nVidia GeForce GTX 680, Search

July 23, 2014 by hgpu

A Study on GPU Computing and Accelerating Simulation of Sedimentary Rock Structure

Koushik Mandal

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Tags: Computer science, CUDA, Linear Algebra, Matrix multiplication, nVidia, Tesla C2075, Thesis

July 23, 2014 by hgpu

A Multi-GPU Compute Solution for Optimized Genomic Selection Analysis

Trevor DeVore

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Tags: Bayesian, Bioinformatics, Biology, CUDA, Heterogeneous systems, nVidia, Tesla K20, Tesla K40, Thesis

July 23, 2014 by hgpu

Accelerating Volume Image Registration through Correlation Ratio based Methods on GPUs

Ang Li, Akash Kumar

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Tags: CUDA, Image processing, Image registration, nVidia, Tesla C2075

July 23, 2014 by hgpu

Faster Multipattern Matching System on GPU Based on Aho-Corasick Algorithm

Gaurav Bhamare, Satish Banait

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Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 680, Security

July 23, 2014 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

Performance Efficient DNA Sequence Detection on GPU Using Parallel Pattern Matching Approach

ReGen: Optimizing Genetic Selection Algorithms for Heterogeneous Computing

Parallel solutions of static Hamilton-Jacobi equations for simulations of geological folds

ADHA: Automatic Data layout framework for Heterogeneous Architectures

Multi-Core Programming Design Patterns: Stream Processing Algorithms for Dynamic Scene Perceptions

Abstraction and Implementation of Unstructured Grid Algorithms on Massively Parallel Heterogeneous Architectures

Electromagnetic Computation and Visualization of Transmission Particle Model and its Simulation Based on GPU

Solution Level Parallelization of Local Search Metaheuristic Algorithm on GPU

A Study on GPU Computing and Accelerating Simulation of Sedimentary Rock Structure

A Multi-GPU Compute Solution for Optimized Genomic Selection Analysis

Accelerating Volume Image Registration through Correlation Ratio based Methods on GPUs

Faster Multipattern Matching System on GPU Based on Aho-Corasick Algorithm

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

Most viewed papers (last 30 days)