high performance computing on graphics processing units: hgpu.org

Programming

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Harnessing Aspect Oriented Programming on GPU: Application to Warp-Level Parallelism (WLP)

Jonathan Passerat-Palmbach, Pierre Schweitzer, Jonathan Caux, Pridi Siregar, Claude Mazel, David Hill

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Tags: Computer science, CUDA, nVidia, Stochastic simulation, Tesla C2050, Warp level parallelism

January 19, 2015 by hgpu

Accelerating mahout on heterogeneous clusters using HadoopCL

Xiangyu Li

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Tags: Cluster computing, Computer science, GPU cluster, Heterogeneous systems, Java, Machine learning, MapReduce, nVidia, OpenCL, Tesla K20, Thesis

January 19, 2015 by hgpu

A fast marching method based back projection algorithm for photoacoustic tomography in heterogeneous media

Tianren Wang, Yun Jing

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Tags: CUDA, Heterogeneous systems, Image reconstruction, Medical Physics, Medicine, nVidia, Physics, Tesla C2075, Tomography

January 19, 2015 by hgpu

Hybrid Multicore Algorithms for Some Semi-Numerical Applications and Graphs

Dip Sankar Banerjee

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Tags: Algorithms, Cell processor, Computer science, CUDA, Distributed computing, List ranking, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 580, OpenCL, Sorting, Thesis

January 19, 2015 by hgpu

Indexing of Spatiotemporal Trajectories for Efficient Distance Threshold Similarity Searches on the GPU

Michael Gowanlock, Henri Casanova

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Tags: Astrophysics, Computer science, Databases, nVidia, OpenCL, Tesla C2075

January 19, 2015 by hgpu

CURFIL: Random Forests for Image Labeling on GPU

Hannes Schulz, Benedikt Waldvogel, Rasha Sheikh, Sven Behnke

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 675 M, nVidia GeForce GTX Titan, Package, Tesla K20

January 16, 2015 by hgpu

SW#db: GPU-accelerated exact sequence similarity database search

Matija Korpar, Martin Sosic, Dino Blazeka, Mile Sikic

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Tags: Algorithms, Biology, CUDA, Databases, Next-Generation sequencing, nVidia, nVidia GeForce GTX 690, nVidia GeForce GTX 780, Package, Smith-Waterman algorithm

January 16, 2015 by hgpu

Parallel Algorithms for Counting Problems on Graphs Using Graphics Processing Units

Amlan Chatterjee

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Tags: Algorithms, Computer science, CUDA, Graph theory, nVidia, Sorting, Tesla K20, Thesis

January 16, 2015 by hgpu

GPU Processing for UAS-Based LFM-CW Stripmap SAR

Craig Stringham, David G. Long

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Tags: Algorithms, CUDA, Image processing, Motion compensation, nVidia, nVidia GeForce GTX 285, SAR

January 16, 2015 by hgpu

Parallel Implementation of the Finite Element Method on Graphics Processors for the Solution of Incompressible Flows

Mahmut Murat Gocmen

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Tags: Algorithms, CUBLAS, CUDA, FEM, Finite element method, Fluid dynamics, Lattice Boltzmann model, nVidia, nVidia GeForce GTX 280, Package, Tesla C2075, Thesis

January 16, 2015 by hgpu

A Novel Computational Model for GPUs with Applications to Efficient Algorithms

Atsushi Koike, Kunihiko Sadakane

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Tags: Algorithms, Computer science, CUDA, nVidia, Sorting, Tesla C1060, Tesla K20

January 15, 2015 by hgpu

Identification and Elimination of Platform-Specific Code Smells in High Performance Computing Applications

Chunyan Wang, Shoichi Hirasawa, Hiroyuki Takizawa, Hiroaki Kobayashi

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Tags: Computer science, CUDA, nVidia, OpenACC, OpenCL, Tesla C1060, Tesla C2070, Tesla K20

January 15, 2015 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

Harnessing Aspect Oriented Programming on GPU: Application to Warp-Level Parallelism (WLP)

Accelerating mahout on heterogeneous clusters using HadoopCL

A fast marching method based back projection algorithm for photoacoustic tomography in heterogeneous media

Indexing of Spatiotemporal Trajectories for Efficient Distance Threshold Similarity Searches on the GPU

CURFIL: Random Forests for Image Labeling on GPU

SW#db: GPU-accelerated exact sequence similarity database search

Parallel Algorithms for Counting Problems on Graphs Using Graphics Processing Units

GPU Processing for UAS-Based LFM-CW Stripmap SAR

Parallel Implementation of the Finite Element Method on Graphics Processors for the Solution of Incompressible Flows

A Novel Computational Model for GPUs with Applications to Efficient Algorithms

Identification and Elimination of Platform-Specific Code Smells in High Performance Computing Applications

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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