high performance computing on graphics processing units: hgpu.org

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OpenMP performance analysis for many-core platforms with non-uniform memory access

Pablo Gonzalez de Aledo Marugan, Javier Gonzalez Bayon, Pablo Sanchez Espeso, Juan Casal Martin

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Tags: Computer science, Heterogeneous systems, OpenCL, OpenMP, Performance

May 2, 2013 by hgpu

GPU Acceleration of the Variational Monte Carlo Method for Many Body Physics

Rajagopalan Kaushik Ragavan

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Tags: CUDA, Data parallelism, Heterogeneous systems, Monte Carlo simulation, MPI, nVidia, Physics, Tesla M2070, Thesis

May 1, 2013 by hgpu

Parallel For Loops on Heterogeneous Resources

Frederick Edward Weber

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Tags: ATI, ATI Radeon HD 7970, Computer science, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, OpenCL, Performance, Thesis

May 1, 2013 by hgpu

GPU-based Steady-State Solution of the Chemical Master Equation

Marco Maggioni, Tanya Berger-Wolf, Jie Liang

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Tags: Biology, CUDA, Macromolecule, nVidia, nVidia GeForce GTX 580, Probability, Sparse matrix

May 1, 2013 by hgpu

ACL2 Meets the GPU: Formalizing a CUDA-based Parallelizable All-Pairs Shortest Path Algorithm in ACL2

David S. Hardin, Samuel S. Hardin

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Tags: Computer science, CUDA, Data Structures and Algorithms, Logic in Computer Science, nVidia, nVidia GeForce GT 650 M

May 1, 2013 by hgpu

Graphics Programming on the Web WebCL Course Notes

Mikael Bourges-Sevenier

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Tags: Computer science, OpenCL, Review, Tutorial

May 1, 2013 by hgpu

Automatic Compilation for Heterogeneous Architectures with Single Assignment C

Miguel Sousa Diogo

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Tags: Code generation, Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, nVidia GeForce GTX 580, Thesis

April 30, 2013 by hgpu

Improving Numerical Accuracy for Non-Negative Matrix Multiplication on GPUs using Recursive Algorithms

Matthew Badin, Paolo D'Alberto, Lubomir Bic, Michael Dillencourt, Alexandru Nicolau

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Tags: Algorithms, BLAS, Computer science, CUDA, Matrix multiplication, nVidia, Performance, Tesla C2070

April 30, 2013 by hgpu

MPI Derived Datatypes Processing on Noncontiguous GPU-resident Data

John Jenkins, James Dinan, Pavan Balaji, Tom Peterka, Nagiza F. Samatova, Rajeev Thakur

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Tags: Algorithms, Computer science, CUDA, MPI, nVidia, Tesla C2050

April 30, 2013 by hgpu

High Performance Data Leak Detection

Xiaokui Shu, Jing Zhang, Danfeng (Daphne) Yao, Wu-Chun Feng

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Tags: Algorithms, Computer science, CUDA, nVidia, Security, Tesla C2050

April 30, 2013 by hgpu

Mr. Scan: Extreme Scale Density-Based Clustering using a Tree-Based Network of GPGPU Nodes

Benjamin Welton, Evan Samanas, Barton P. Miller

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Tags: Algorithms, Clustering, Computer science, CUDA, Data mining, nVidia, Tesla K20

April 30, 2013 by hgpu

RealTime GPU-Based Motion Planning for Task Executions

Chonhyon Park, Jia Pan, Dinesh Manocha

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 680

April 29, 2013 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Programming

OpenMP performance analysis for many-core platforms with non-uniform memory access

GPU Acceleration of the Variational Monte Carlo Method for Many Body Physics

Parallel For Loops on Heterogeneous Resources

GPU-based Steady-State Solution of the Chemical Master Equation

ACL2 Meets the GPU: Formalizing a CUDA-based Parallelizable All-Pairs Shortest Path Algorithm in ACL2

Graphics Programming on the Web WebCL Course Notes

Automatic Compilation for Heterogeneous Architectures with Single Assignment C

Improving Numerical Accuracy for Non-Negative Matrix Multiplication on GPUs using Recursive Algorithms

MPI Derived Datatypes Processing on Noncontiguous GPU-resident Data

High Performance Data Leak Detection

Mr. Scan: Extreme Scale Density-Based Clustering using a Tree-Based Network of GPGPU Nodes

RealTime GPU-Based Motion Planning for Task Executions

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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