high performance computing on graphics processing units: hgpu.org

Programming

hgpu.org » Programming

Parallelization of tau-leap coarse-grained Monte Carlo simulations on GPUs

Lifan Xu, Michela Taufer, Stuart Collins, Dionisios G. Vlachos

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Tags: Chemistry, CUDA, Data parallelism, GPU cluster, Monte Carlo simulation, nVidia, Physics, Tesla S1070

June 9, 2011 by hgpu

Compensating Indirect Scattering for Immersive and Semi-Immersive Projection Displays

Oliver Bimber, Anselm Grundhofer, Thomas Zeidler, Daniel Danch, Pedro Kapakos

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Tags: Algorithms, Computer science, Presentation, Rendering, Sparse matrix, Virtual reality

June 8, 2011 by hgpu

Realtime Ray Tracing on a Hibrid Parallel Architecture

Xin Yang, Duan-qing Xu, Wen-zhi Chen

Tags: Algorithms, Computer science, Rendering

June 8, 2011 by hgpu

Parallel accelerators for GlimmerHMM bioinformatics algorithm

Nafsika Chrysanthou, Grigorios Chrysos, Euripides Sotiriades, Ioannis Papaefstathiou

Tags: Algorithms, Bioinformatics, Biology, FPGA, Genetics

June 8, 2011 by hgpu

Fast, Processor-Cardinality Agnostic PRNG with a Tracking Application

Andrew Janowczyk, Sharat Chandran, Srinivas Aluru

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 8800 GTS, Particle filtering, Pseudo-random number generators

June 7, 2011 by hgpu

GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU cores

Satish Chikkagoudar, Kai Wang, Mingyao Li

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Source codes

Tags: Biology, CUDA, Genetics, nVidia, nVidia Quadro FX 1800, Package, Tesla C1060

June 7, 2011 by hgpu

DEMCMC-GPU: An Efficient Multi-Objective Optimization Method with GPU Acceleration on the Fermi Architecture

Weihang Zhu, Ashraf Yaseen, Yaohang Li

Tags: Computer science, CUDA, Differential evolution, Monte Carlo simulation, nVidia, Optimization

June 7, 2011 by hgpu

Multi-thread implementations of the lattice Boltzmann method on non-uniform grids for CPUs and GPUs

M. Schonherr, K. Kucher, M. Geier, M. Stiebler, S. Freudiger, M. Krafczyk

Tags: CUDA, Lattice Boltzmann model, Mathematics, nVidia

June 7, 2011 by hgpu

Image-based fast three-dimensional leaf modeling

Tingting Wang, Jingqiao Zhang

Tags: 3D Graphics and Realism, Algorithms, Computer science, Visualization

June 6, 2011 by hgpu

Massively Parallel Network Coding on GPUs

Xiaowen Chu, Kaiyong Zhao, Mea Wang

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Tags: Algorithms, Computer science, CUDA, Networks, nVidia, nVidia GeForce GTX 260

June 6, 2011 by hgpu

Real-time 3D surface modeling for image based relighting

Sae-woon Ryu, Sang Hwa Lee, Jong-il Park

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Tags: 3D Graphics and Realism, Algorithms, Computer science, Real-time graphics, Rendering

June 6, 2011 by hgpu

Leveraging Computation Sharing and Parallel Processing in Location-Based Services

Jonathan Cazalas, Kien Hua

Tags: Algorithms, Computer science, Databases

June 6, 2011 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Programming

Parallelization of tau-leap coarse-grained Monte Carlo simulations on GPUs

Compensating Indirect Scattering for Immersive and Semi-Immersive Projection Displays

Realtime Ray Tracing on a Hibrid Parallel Architecture

Parallel accelerators for GlimmerHMM bioinformatics algorithm

Fast, Processor-Cardinality Agnostic PRNG with a Tracking Application

GENIE: a software package for gene-gene interaction analysis in genetic association studies using multiple GPU or CPU cores

DEMCMC-GPU: An Efficient Multi-Objective Optimization Method with GPU Acceleration on the Fermi Architecture

Multi-thread implementations of the lattice Boltzmann method on non-uniform grids for CPUs and GPUs

Image-based fast three-dimensional leaf modeling

Massively Parallel Network Coding on GPUs

Real-time 3D surface modeling for image based relighting

Leveraging Computation Sharing and Parallel Processing in Location-Based Services

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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