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Nuclei: GPU-Accelerated Many-Core Network Coding

Hassan Shojania, Baochun Li, Xin Wang

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Tags: Computer science, CUDA, GPU cluster, nVidia, nVidia GeForce 8600 M GT, nVidia GeForce 8800 GT, nVidia GeForce GTX 280

January 4, 2011 by hgpu

A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs

Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Sequence alignment, Smith-Waterman algorithm

January 4, 2011 by hgpu

Approximate Belief Propagation by Hierarchical Averaging of Outgoing Messages

Koichi Ogawara

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Tags: Computer vision, CUDA, Image processing, nVidia, nVidia GeForce GTX 285, Pattern recognition

January 4, 2011 by hgpu

Speeding up subset seed algorithm for intensive protein sequence comparison

Van Hoa Nguyen, Dominique Lavenier

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Sequence alignment

January 4, 2011 by hgpu

Fast GPU-based space-time correlation for activity recognition in video sequences

Mahsan Rofouei, Maryam Moazeni, Majid Sarrafzadeh

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Tags: Computer vision, CUDA, Image processing, nVidia, nVidia Quadro FX 5600

January 4, 2011 by hgpu

Local Search Algorithms on Graphics Processing Units. A Case Study: The Permutation Perceptron Problem

The Van Luong, Nouredine Melab, El-Ghazali Talbi

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 8600 M GT, nVidia GeForce 8800 GTX, nVidia GeForce GTX 280, Search

January 4, 2011 by hgpu

Efficient Multiplication of Polynomials on Graphics Hardware

Pavel Emeliyanenko

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Tags: Computer science, CUDA, Linear Algebra, nVidia

January 4, 2011 by hgpu

Engineering of Computer Vision Algorithms Using Evolutionary Algorithms

Marc Ebner

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Tags: Algorithms, Computer science, Computer vision, nVidia, nVidia GeForce 9600 GT, OpenGL

January 4, 2011 by hgpu

GPU-Based Conjugate Gradient Solver for Lattice QCD with Domain-Wall Fermions

Ting-Wai Chiu, Tung-Han Hsieh, Yao-Yuan Mao, Kenji Ogawa

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Tags: Conjugate gradient solver, CUDA, High Energy Physics - Lattice, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Physics, QCD

January 4, 2011 by hgpu

Towards Large-Scale Molecular Dynamics Simulations on Graphics Processors

Joseph E. Davis, Adnan Ozsoy, Sandeep Patel, Michela Taufer

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Tags: Biology, Chemistry, CUDA, Molecular dynamics, nVidia, nVidia GeForce 9800 GX2, nVidia GeForce GTX 280, nVidia Quadro FX 5600

January 3, 2011 by hgpu

Wave field synthesis for 3D audio: architectural prospectives

Dimitris Theodoropoulos, Catalin Bogdan Ciobanu, Georgi Kuzmanov

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Tags: CUDA, FPGA, nVidia, nVidia GeForce 8600 GT, Signal processing

January 3, 2011 by hgpu

Achieving O(1) IP lookup on GPU-based software routers

Jin Zhao, Xinya Zhang, Xin Wang, Xiangyang Xue

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Tags: Computer science, CUDA, Networks, nVidia, nVidia GeForce 8800 GT

January 3, 2011 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Programming

Nuclei: GPU-Accelerated Many-Core Network Coding

A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs

Approximate Belief Propagation by Hierarchical Averaging of Outgoing Messages

Speeding up subset seed algorithm for intensive protein sequence comparison

Fast GPU-based space-time correlation for activity recognition in video sequences

Local Search Algorithms on Graphics Processing Units. A Case Study: The Permutation Perceptron Problem

Efficient Multiplication of Polynomials on Graphics Hardware

Engineering of Computer Vision Algorithms Using Evolutionary Algorithms

GPU-Based Conjugate Gradient Solver for Lattice QCD with Domain-Wall Fermions

Towards Large-Scale Molecular Dynamics Simulations on Graphics Processors

Wave field synthesis for 3D audio: architectural prospectives

Achieving O(1) IP lookup on GPU-based software routers

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

Most viewed papers (last 30 days)