high performance computing on graphics processing units: hgpu.org

Programming

hgpu.org » Programming

Parallel external sorting for CUDA-enabled GPUs with load balancing and low transfer overhead

Hagen Peters, Ole Schulz-Hildebrandt, Norbert Luttenberger

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 280, Sorting

November 2, 2010 by hgpu

Improving Performance of Matrix Multiplication and FFT on GPU

Xiang Cui, Yifeng Chen, Hong Mei

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Tags: Computer science, CUDA, FFT, Linear Algebra, Matrix multiplication, nVidia, nVidia GeForce GTX 280

November 2, 2010 by hgpu

A control-structure splitting optimization for GPGPU

Snaider Carrillo, Jakob Siegel, Xiaoming Li

Tags: Algorithm optimization, Computer science, CUDA, nVidia, Programming techniques

November 1, 2010 by hgpu

A GPU accelerated storage system

Abdullah Gharaibeh, Samer A. Kiswany, Sathish Gopalakrishnan, Matei Ripeanu

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8600, nVidia GeForce 8800 GT, nVidia GeForce 9800 GX2, Performance, Storage system

November 1, 2010 by hgpu

Fast parallel Particle-To-Grid interpolation for plasma PIC simulations on the GPU

G. Stantchev, W. Dorland, N. Gumerov

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Tags: Computer science, CUDA, Numerical simulation, nVidia, Particle-in-cell methods, Plasma physics

November 1, 2010 by hgpu

CUDA-Lite: Reducing GPU programming complexity

Sain-zee Ueng, Melvin Lathara, Sara S. Baghsorkhi, Wen-mei W. Hwu

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Programming techniques

November 1, 2010 by hgpu

Program optimization space pruning for a multithreaded gpu

Shane Ryoo, Christopher I. Rodrigues, Sam S. Stone, Sara S. Baghsorkhi, Sain Z. Ueng, John A. Stratton, Wen mei

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Optimization, Performance, Programming techniques

November 1, 2010 by hgpu

High-throughput sequence alignment using Graphics Processing Units

Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment

November 1, 2010 by hgpu

Graphics Processing Units and High-Dimensional Optimization

Hua Zhou, Kenneth Lange, Marc A. Suchard

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Tags: Block relaxation, CUBLAS, CUDA, EM and MM algorithms, Mathematics, Multidimensional scaling, Nonnegative matrix factorization, nVidia, nVidia GeForce GTX 280, PET scanning, Statistics

October 30, 2010 by hgpu

Quantum Chemistry on Graphical Processing Units. 1. Strategies for Two-Electron Integral Evaluation

Ivan S. Ufimtsev, Todd J. Martinez

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Tags: Chemistry, Computational chemistry, CUDA, Molecular modeling, nVidia, nVidia GeForce 8800 GTX

October 30, 2010 by hgpu

A Memory Model for Scientific Algorithms on Graphics Processors

Naga K. Govindaraju, Scott Larsen, Jim Gray, Dinesh Manocha

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Tags: Algorithms, Computer science, FFT, Memory model, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce 7800 GTX, nVidia GeForce 7900 GTX, Sorting

October 30, 2010 by hgpu

Optimizing data intensive GPGPU computations for DNA sequence alignment

Cole Trapnell, Michael C. Schatz

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

October 30, 2010 by hgpu

Code generated HPC Kernels Using Llama-2-70b

Comparing Llama-2 and GPT-3 LLMs for HPC kernels generation

Scope is all you need: Transforming LLMs for HPC Code

pocl - Portable Computing Language

PoCL-R: An Open Standard Based Offloading Layer for Heterogeneous Multi-Access Edge Computing with Server Side Scalability

HPAC-Offload: Accelerating HPC Applications with Portable Approximate Computing on the GPU

openCLDispatcher

Novel insights on atomic synchronization for sort-based group-by on GPUs

CEED Benchmarks

Performant low-order matrix-free finite element kernels on GPU architectures

Sieve: Stratified GPU-Compute Workload Sampling

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high performance computing on graphics processing units: hgpu.org

Programming

Parallel external sorting for CUDA-enabled GPUs with load balancing and low transfer overhead

Improving Performance of Matrix Multiplication and FFT on GPU

A control-structure splitting optimization for GPGPU

A GPU accelerated storage system

Fast parallel Particle-To-Grid interpolation for plasma PIC simulations on the GPU

CUDA-Lite: Reducing GPU programming complexity

Program optimization space pruning for a multithreaded gpu

High-throughput sequence alignment using Graphics Processing Units

Graphics Processing Units and High-Dimensional Optimization

Quantum Chemistry on Graphical Processing Units. 1. Strategies for Two-Electron Integral Evaluation

A Memory Model for Scientific Algorithms on Graphics Processors

Optimizing data intensive GPGPU computations for DNA sequence alignment

Recent source codes

Code generated HPC Kernels Using Llama-2-70b

Scope is all you need: Transforming LLMs for HPC Code

pocl - Portable Computing Language

HPAC-Offload: Accelerating HPC Applications with Portable Approximate Computing on the GPU

openCLDispatcher

CEED Benchmarks

Sieve: Stratified GPU-Compute Workload Sampling

EngineCL: Usability and Performance in Heterogeneous Computing

Ginkgo: high-performance linear algebra library for manycore systems

AlphaFold2

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