high performance computing on graphics processing units: hgpu.org

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Theano-MPI: a Theano-based Distributed Training Framework

He Ma, Fei Mao, Graham W. Taylor

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Tags: Computer science, CUDA, Deep learning, Machine learning, MPI, nVidia, Package, Tesla K20, Tesla K80

May 28, 2016 by hgpu

Training Neural Networks Without Gradients: A Scalable ADMM Approach

Gavin Taylor, Ryan Burmeister, Zheng Xu, Bharat Singh, Ankit Patel, Tom Goldstein

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Tags: Computer science, CUDA, Machine learning, MPI, Neural networks, nVidia, Tesla K40, Torch

May 9, 2016 by hgpu

On the design of sparse hybrid linear solvers for modern parallel architectures

Stojce Nakov

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Tags: Algorithms, Computer science, CUDA, Heterogeneous systems, Linear Algebra, MPI, nVidia, Sparse linear iterative solvers, Sparse matrix, Tesla K40, Tesla M2070, Thesis

April 29, 2016 by hgpu

Parallel Subgraph Mining on Hybrid Platforms: HPC Systems, Multi-Cores and GPUs

Nilothpal Talukder

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Tags: Algorithms, Computer science, CUDA, Data mining, Databases, MPI, nVidia, Tesla C2075, Thesis

April 29, 2016 by hgpu

GPU-Aware Non-contiguous Data Movement In Open MPI

Wei Wu, George Bosilca, Rolf vandeVaart, Sylvain Jeaugey, Jack Dongarra

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Tags: Computer science, CUDA, MPI, nVidia, Tesla K40

April 26, 2016 by hgpu

Heterogeneous parallel algorithms for Computational Fluid Dynamics on unstructured meshes

Guillermo Andres Oyarzun Altamirano

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Tags: cfd, CUDA, Fluid dynamics, MPI, nVidia, OpenCL, SoC, Tesla M2090, Thesis

March 5, 2016 by hgpu

Optimization of Molecular Dynamics Simulation Code and Applications to Biomolecular Systems

David M. Bowman

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Tags: Biochemistry, Biomolecules, Chemistry, CUDA, Molecular dynamics, MPI, nVidia, OpenCL, OpenMP, Thesis

March 1, 2016 by hgpu

FARGO3D: A new GPU-oriented MHD code

Pablo Benitez-Llambay, Frederic Masset

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Tags: Astrophysics, CUDA, Finite difference, Instrumentation and Methods for Astrophysics, Magnetohydrodynamics, MPI, N-body simulation, nVidia, Package, Physics, Tesla K20

February 10, 2016 by hgpu

Contributions of hybrid architectures to depth imaging: a CPU, APU and GPU comparative study

Issam Said

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Tags: APU, Computer science, Geophysics, Geoscience, GPU cluster, MPI, nVidia, OpenCL, Tesla K40, Thesis

January 16, 2016 by hgpu

Odyssey: A Public GPU-Based Code for General-Relativistic Radiative Transfer in Kerr Spacetime

Hung-Yi Pu, Kiyun Yun, Ziri Younsi, Suk-Jin Yoon

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Tags: Astrophysics, CUDA, High Energy Astrophysical Phenomena, MPI, nVidia, nVidia GeForce GTX 780 Ti, Package, Raytracing

January 14, 2016 by hgpu

GPU Remote Memory Access Programming

Jeremia Bar

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Tags: Computer science, CUDA, GPU cluster, MPI, nVidia, OpenMPI, Tesla K80, Thesis

January 12, 2016 by hgpu

On the Development and Implementation of High-Order Flux Reconstruction Schemes for Computational Fluid Dynamics

Freddie David Witherden

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Tags: AMD FirePro W9100, ATI, CUDA, Finite difference, Fluid dynamics, Heterogeneous systems, MPI, nVidia, OpenCL, Package, Python, Tesla K40, Thesis

December 23, 2015 by hgpu

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

PyOMP: Parallel programming for CPUs and GPUs with OpenMP and Python

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

Understanding GEMM Performance and Energy on NVIDIA Ada Lovelace: A Machine Learning-Based Analytical Approach

HiRep

Scaling SU(2) to 1000 GPUs using HiRep

Gaia AVU-GSR

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

gpuPairHMM: High-speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs

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high performance computing on graphics processing units: hgpu.org

Theano-MPI: a Theano-based Distributed Training Framework

Training Neural Networks Without Gradients: A Scalable ADMM Approach

On the design of sparse hybrid linear solvers for modern parallel architectures

Parallel Subgraph Mining on Hybrid Platforms: HPC Systems, Multi-Cores and GPUs

GPU-Aware Non-contiguous Data Movement In Open MPI

Heterogeneous parallel algorithms for Computational Fluid Dynamics on unstructured meshes

Optimization of Molecular Dynamics Simulation Code and Applications to Biomolecular Systems

FARGO3D: A new GPU-oriented MHD code

Contributions of hybrid architectures to depth imaging: a CPU, APU and GPU comparative study

Odyssey: A Public GPU-Based Code for General-Relativistic Radiative Transfer in Kerr Spacetime

GPU Remote Memory Access Programming

On the Development and Implementation of High-Order Flux Reconstruction Schemes for Computational Fluid Dynamics

Recent source codes

tdg-benchs: benchmarks used to test the performance of taskgraph

SW#SYCL

LLOR: Automatic Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

HiRep

Gaia AVU-GSR

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

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