high performance computing on graphics processing units: hgpu.org

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Parallel, distributed and GPU computing technologies in single-particle electron microscopy

M. Schmeisser, B. C. Heisen, M. Luettich, B. Busche, F. Hauer, T. Koske, K. H. Knauber, H. Stark

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Tags: Biology, Cg, Cluster computing, Electron microscopy, GLSL, MPI, nVidia, OpenGL, Physics

November 8, 2010 by hgpu

GPU-based physical cut in interactive haptic simulations

Davide Zerbato, Daniele Baschirotto, Davide Baschirotto, Debora Botturi, Paolo Fiorini

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Tags: GLSL, Medicine, nVidia, nVidia GeForce 8800 GTX, Surgical simulation

November 7, 2010 by hgpu

GPUCV: A Framework for Image Processing Acceleration with Graphics Processors

Jean-philippe Farrugia, Patrick Horain, Erwan Guehenneux, Yannick Alusse

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Tags: Computer science, Computer vision, GLSL, Image processing, nVidia, nVidia GeForce 7800 GTX, OpenGL, Package

November 4, 2010 by hgpu

GPU Accelerated Smith-Waterman

Yang Liu, Wayne Huang, John Johnson, Sheila Vaidya

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Tags: Bioinformatics, Biology, Computational biology, Computer science, GLSL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Smith-Waterman algorithm

November 1, 2010 by hgpu

Bio-sequence database scanning on a GPU

Weiguo Liu, B. Schmidt, G. Voss, A. Schroder, W. Muller-Wittig

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Tags: Biology, Computational biology, GLSL, nVidia, nVidia GeForce 6800 GTO, nVidia GeForce 7800 GTX, OpenGL, Smith-Waterman algorithm

October 30, 2010 by hgpu

Visualization and GPU-accelerated simulation of medical ultrasound from CT images

Oliver Kutter, Ramtin Shams, Nassir Navab

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Tags: ATI, ATI Radeon 1950 PRO, Computer science, GLSL, Medicine, nVidia, nVidia Quadro FX 3600 M, nVidia Quadro FX 5600, OpenGL, Ultrasound, Visualization

October 28, 2010 by hgpu

GpuCV: A GPU-Accelerated Framework for Image Processing and Computer Vision

Yannick Allusse, Patrick Horain, Ankit Agarwal, Cindula Saipriyadarshan

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Tags: Computer science, Computer vision, CUDA, GLSL, Image processing, nVidia, nVidia GeForce GTX 280, OpenGL, Package

October 28, 2010 by hgpu

Stochastic DT-MRI Connectivity Mapping on the GPU

Tim McGraw, Mariappan Nadar

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Tags: Computer science, Diffusion tensor, GLSL, Magnetic resonance imaging, nVidia, nVidia GeForce 8800 GTX, OpenGL, Stochastic tractography

October 28, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Parallel, distributed and GPU computing technologies in single-particle electron microscopy

GPU-based physical cut in interactive haptic simulations

GPUCV: A Framework for Image Processing Acceleration with Graphics Processors

GPU Accelerated Smith-Waterman

Bio-sequence database scanning on a GPU

Visualization and GPU-accelerated simulation of medical ultrasound from CT images

GpuCV: A GPU-Accelerated Framework for Image Processing and Computer Vision

Stochastic DT-MRI Connectivity Mapping on the GPU

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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