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Implementation of K-shortest Path Algorithm in GPU Using CUDA

Avadhesh Pratap Singh, Dhirendra Pratap Singh

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, Sequence alignment, Tesla C2075

June 7, 2015 by hgpu

Meta-Programming and Auto-Tuning in the Search for High Performance GPU Code

Michael Vollmer, Bo Joel Svensson, Eric Holk, Ryan Newton

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Tags: Computer science, CUDA, nVidia, Performance, Search strategies, Tesla K40

June 7, 2015 by hgpu

The implementation and optimization of Bitonic sort algorithm based on CUDA

Qi Mu, Liqing Cui, Yufei Song

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Tags: Algorithms, Computer science, CUDA, nVidia, Sorting

June 7, 2015 by hgpu

Accelerated Nodal Discontinuous Galerkin Simulations for Reverse Time Migration with Large Clusters

Axel Modave, Amik St-Cyr, Wim A. Mulder, Tim Warburton

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Tags: ATI, ATI Radeon HD 7970, Computational Physics, CUDA, Geophysics, MPI, nVidia, nVidia GeForce GTX 980, OpenCL, Physics, Tesla K20, Tesla K40

June 5, 2015 by hgpu

Blocks and Fuel: Frameworks for deep learning

Bart van Merrienboer, Dzmitry Bahdanau, Vincent Dumoulin, Dmitriy Serdyuk, David Warde-Farley, Jan Chorowski, Yoshua Bengio

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Tags: Computer science, CUDA, Deep learning, Linear Algebra, Machine learning, MPI, Neural networks, nVidia, Package, Python, Symbolic Computation, Visualization

June 5, 2015 by hgpu

Tackling Exascale Software Challenges in Molecular Dynamics Simulations with GROMACS

Pall Szilard, Mark James Abraham, Carsten Kutzner, Berk Hess, Erik Lindahl

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Tags: Algorithms, Biomolecules, Computer science, CUDA, Heterogeneous systems, Molecular dynamics, Molecular simulation, MPI, nVidia, Tesla C2070, Tesla K20

June 5, 2015 by hgpu

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

Fredrik Andersson, Marcus Carlsson, Viktor V. Nikitin

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Tags: Algorithms, CUDA, FFT, Image processing, Mathematics, Numerical Analysis, nVidia, nVidia GeForce GTX 770, Radon transform

June 5, 2015 by hgpu

Genetically Improved BarraCUDA

W. B. Langdon, Brian Yee Hong Lam

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Tags: Algorithms, Benchmarking, Biology, CUDA, Genomics, nVidia, nVidia GeForce GT 730, Package, Tesla K20, Tesla K40, Tesla K80

June 1, 2015 by hgpu

A Parallel Cellular Automaton Simulation Framework using CUDA

Ryno Fourie

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Tags: Algorithms, Cellular automata, Computer science, CUDA, nVidia, nVidia GeForce GT 650 M, nVidia GeForce GTX 780, Thesis

June 1, 2015 by hgpu

Quantum Chemistry for Solvated Molecules on Graphical Processing Units (GPUs) using Polarizable Continuum Models

Fang Liu, Nathan Luehr, Heather J. Kulik, Todd J. Martinez

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Tags: Biomolecules, Chemical Physics, Chemistry, CUDA, nVidia, nVidia GeForce GTX Titan, Physics

June 1, 2015 by hgpu

Large-scale network simulation over heterogeneous computing architecture

Bilel Ben Romdhanne

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 860, Thesis

May 29, 2015 by hgpu

Design and Optimization of OpenFOAM-based CFD Applications for Hybrid and Heterogeneous HPC Platforms

Amani AlOnazi, David Keyes, Alexey Lastovetsky, Vladimir Rychkov

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Tags: Conjugate gradient solver, CUDA, Fluid dynamics, Heterogeneous systems, MPI, nVidia, nVidia GeForce GTX Titan

May 29, 2015 by hgpu

Efficient GPU Implementation of Multi-Precision Integer Division

ParEval: A Parallel Code Evaluation Benchmark

ParEval-Repo: A Benchmark Suite for Evaluating LLMs with Repository-level HPC Translation Tasks

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

Libra: Synergizing CUDA and Tensor Cores for High-Performance Sparse Matrix Multiplication

exa-AMD: Exascale Accelerated Materials Discovery

Accelerated discovery and design of Fe-Co-Zr magnets with tunable magnetic anisotropy through machine learning and parallel computing

WiLLM: An Open Wireless LLM Communication System

Vcc: the Vulkan Clang Compiler

No More Shading Languages: Compiling C++ to Vulkan Shaders

hpcbench: A set of benchmarking utilities for biomolecular simulation tools

Engineering Supercomputing Platforms for Biomolecular Applications

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

chemtrain: Training Molecular Dynamics Potentials in JAX

chemtrain-deploy: A parallel and scalable framework for machine learning potentials in million-atom MD simulations

microSYCL: SYCL micro-benchmarks repository

Exploring SYCL as a Portability Layer for High-Performance Computing on CPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Implementation of K-shortest Path Algorithm in GPU Using CUDA

Meta-Programming and Auto-Tuning in the Search for High Performance GPU Code

The implementation and optimization of Bitonic sort algorithm based on CUDA

Accelerated Nodal Discontinuous Galerkin Simulations for Reverse Time Migration with Large Clusters

Blocks and Fuel: Frameworks for deep learning

Tackling Exascale Software Challenges in Molecular Dynamics Simulations with GROMACS

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

Genetically Improved BarraCUDA

A Parallel Cellular Automaton Simulation Framework using CUDA

Quantum Chemistry for Solvated Molecules on Graphical Processing Units (GPUs) using Polarizable Continuum Models

Large-scale network simulation over heterogeneous computing architecture

Design and Optimization of OpenFOAM-based CFD Applications for Hybrid and Heterogeneous HPC Platforms

Recent source codes

Efficient GPU Implementation of Multi-Precision Integer Division

ParEval: A Parallel Code Evaluation Benchmark

FlashSparse: Minimizing Computation Redundancy for Fast Sparse Matrix Multiplications on Tensor Cores

exa-AMD: Exascale Accelerated Materials Discovery

WiLLM: An Open Wireless LLM Communication System

Vcc: the Vulkan Clang Compiler

hpcbench: A set of benchmarking utilities for biomolecular simulation tools

HPCTransCompile: An AI Compiler Generated Dataset for High-Performance CUDA Transpilation and LLM Preliminary Exploration

chemtrain: Training Molecular Dynamics Potentials in JAX

microSYCL: SYCL micro-benchmarks repository

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