high performance computing on graphics processing units: hgpu.org

hgpu.org » Package

BarraCUDA – a fast short read sequence aligner using graphics processing units

Petr Klus, Simon Lam, Dag Lyberg, Ming Sin Cheung, Graham Pullan, Ian McFarlane, Giles S. H. Yeo, Brian Y. H. Lam

View

Download (PDF)

Source codes

Tags: Bioinformatics, Biology, CUDA, nVidia, Package, Sequence alignment, Tesla M2050, Tesla M2090

January 13, 2012 by hgpu

Parallel mutual information estimation for inferring gene regulatory networks on GPUs

Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang Muller-Wittig

View

Download (PDF)

Source codes

Tags: Algorithms, Biology, Computational biology, CUDA, Image processing, Machine learning, nVidia, Package, Tesla C2050

January 13, 2012 by hgpu

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Peng Jia, Liming Xuan, Lei Liu, Chaochun Wei

View

Download (PDF)

Source codes

Tags: Biology, Computational biology, CUDA, Genetics, nVidia, Package, Tesla C1060

January 11, 2012 by hgpu

Report on the Feasibility of Implementing PIC Codes on a GPU

Joshua Payne

View

Download (PDF)

Source codes

Tags: CUDA, nVidia, nVidia GeForce GTX 470, Package, Physics, Plasma physics

January 7, 2012 by hgpu

CodePy

Martin Kempf

View

Download (PDF)

Source codes

Tags: Code generation, Computer science, CUDA, nVidia, Package, Python

January 6, 2012 by hgpu

A GPU Implementation of Inclusion-based Points-to Analysis

Mario Mendez-Lojo, Martin Burtscher, Keshav Pingali

View

Download (PDF)

Source codes

Tags: Algorithms, Computer science, CUDA, Graph theory, nVidia, Package, Performance, Programming techniques, Tesla C2070

January 5, 2012 by hgpu

Implementation of Keccak hash function in Tree hashing mode on Nvidia GPU

Guillaume Sevestre

View

Download (PDF)

Source codes

Tags: Computer science, CUDA, Hashing, nVidia, nVidia GeForce GTS 250, nVidia Quadro FX 370 M, Optimization, Package, Security, Stream Ciphers

January 5, 2012 by hgpu

Thermal and Athermal Swarms of Self-Propelled Particles

Nguyen Nguyen, Eric Jankowski, Sharon C. Glotzer

View

Download (PDF)

Source codes

Tags: Computational Physics, Condensed matter, CUDA, nVidia, Package, Physics, Probability, Soft Condensed Matter, Tesla S1070

January 4, 2012 by hgpu

Augmenting Operating Systems With the GPU

Weibin Sun, Robert Ricci

View

Download (PDF)

Source codes

Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, Operating systems, Package

January 2, 2012 by hgpu

Efficient Triangle and Quadrilateral Clipping within Shaders

M. McGuire

View

Download (PDF)

Source codes

Tags: Algorithms, Computer science, GLSL, nVidia, nVidia GeForce GTX 580, OpenGL, Optimization, Package, Rasterization

December 31, 2011 by hgpu

Fast Speaker Diarization Using a Specialization Framework for Gaussian Mixture Model Training

Ekaterina Gonina

View

Download (PDF)

Source codes

Tags: Acoustics, Algorithms, Clustering, Computer science, CUDA, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package, Python, Thesis

December 31, 2011 by hgpu

Fast K-selection Algorithms for Graphics Processing Units

Tolu Alabi, Jeffrey D. Blanchard, Bradley Gordon, Russel Steinbach

View

Download (PDF)

Source codes

Tags: Algorithms, Computer science, CUDA, Mathematical Software, nVidia, Package, Sorting, Tesla C2070

December 31, 2011 by hgpu

CL4SE: A Context Learning Benchmark For Software Engineering Tasks

CodeScaler: Scaling Code LLM Training and Test-Time Inference via Execution-Free Reward Models

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Dr. Kernel: Reinforcement Learning Done Right for Triton Kernel Generations

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

See all packages

* * *

high performance computing on graphics processing units: hgpu.org

BarraCUDA – a fast short read sequence aligner using graphics processing units

Parallel mutual information estimation for inferring gene regulatory networks on GPUs

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Report on the Feasibility of Implementing PIC Codes on a GPU

CodePy

A GPU Implementation of Inclusion-based Points-to Analysis

Implementation of Keccak hash function in Tree hashing mode on Nvidia GPU

Thermal and Athermal Swarms of Self-Propelled Particles

Augmenting Operating Systems With the GPU

Efficient Triangle and Quadrilateral Clipping within Shaders

Fast Speaker Diarization Using a Specialization Framework for Gaussian Mixture Model Training

Fast K-selection Algorithms for Graphics Processing Units

Recent source codes

CL4SE: A Context Learning Benchmark For Software Engineering Tasks

CodeScaler: Scaling Code LLM Training and Test-Time Inference via Execution-Free Reward Models

A Safety Report on GPT-5.2, Gemini 3 Pro, Qwen3-VL, Grok 4.1 Fast, Nano Banana Pro, and Seedream 4.5

DICE: Diffusion Large Language Models Excel at Generating CUDA Kernels

KernelGYM & Dr. Kernel: A distributed GPU environment and a collection of RL training methods to support RL for Kernel Generations

Vortex-Optimized Light-weight Toolchain (VOLT)

SciDef: Automated Definition Extraction from Scientific Literature

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Most viewed papers (last 30 days)