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Parallel algorithms to a parallel hardware: Designing vision algorithms for a GPU

Jun-Sik Kim, Myung Hwangbo, Takeo Kanade

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Tags: Computer science, Computer vision, CUDA, nVidia, nVidia GeForce 8800 GTX, Optical flow

January 8, 2011 by hgpu

Accelerating phase unwrapping and affine transformations for optical quadrature microscopy using CUDA

Perhaad Mistry, Sherman Braganza, David Kaeli, Miriam Leeser

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Tags: Biology, CUDA, Genetics, Image processing, nVidia, nVidia GeForce 8800 GTX

January 6, 2011 by hgpu

A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs

Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Sequence alignment, Smith-Waterman algorithm

January 4, 2011 by hgpu

Speeding up subset seed algorithm for intensive protein sequence comparison

Van Hoa Nguyen, Dominique Lavenier

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Sequence alignment

January 4, 2011 by hgpu

Local Search Algorithms on Graphics Processing Units. A Case Study: The Permutation Perceptron Problem

The Van Luong, Nouredine Melab, El-Ghazali Talbi

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce 8600 M GT, nVidia GeForce 8800 GTX, nVidia GeForce GTX 280, Search

January 4, 2011 by hgpu

Accelerating Euler Equations Numerical Solver on Graphics Processing Units

Pierre Kestener, Frederic Chateau, Romain Teyssier

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Tags: CUDA, Mathematics, Numerical simulation, nVidia, nVidia GeForce 8800 GTX, Tesla S1070

January 2, 2011 by hgpu

Real-time Rendering of Heterogeneous Translucent Objects with Arbitrary Shapes

Yajun Wang, Jiaping Wang, Nicolas Holzschuch, Kartic Subr, Jun-Hai Yong, Baining Guo

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Tags: 3D Graphics and Realism, Computer science, GLSL, nVidia, nVidia GeForce 8800 GTX, OpenGL, Rendering

January 2, 2011 by hgpu

Image-Space GPU Metaballs for Time-Dependent Particle Data Sets

Christoph Muller, Sebastian Grottel, Thomas Ertl

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Tags: Computer science, nVidia, nVidia GeForce 8800 GTX, OpenGL, Rendering

December 29, 2010 by hgpu

PNG1 triangles for tangent plane continuous surfaces on the GPU

Christoph Funfzig, Kerstin Muller, Dianne Hansford, Gerald Farin

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Tags: Algorithms, Computer science, DirectX, nVidia, nVidia GeForce 8800 GTX, Rendering, Triangular meshes

December 29, 2010 by hgpu

Population Parallel GP on the G80 GPU

Denis Robilliard, Virginie Marion-Poty, Cyril Fonlupt

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Source codes

Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce 8800 GTX, Package

December 29, 2010 by hgpu

A SIMD Interpreter for Genetic Programming on GPU Graphics Cards

William B. Langdon, Wolfgang Banzhaf

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Tags: Bioinformatics, Biology, DirectX, Genetics, nVidia, nVidia GeForce 8800 GTX, OpenGL

December 29, 2010 by hgpu

Single-particle 3D reconstruction from cryo-electron microscopy images on GPU

Guangming Tan, Ziyu Guo, Mingyu Chen, Dan Meng

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Tags: CUDA, Electron microscopy, Image processing, Image reconstruction, Medicine, nVidia, nVidia GeForce 8800 GTX

December 29, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Parallel algorithms to a parallel hardware: Designing vision algorithms for a GPU

Accelerating phase unwrapping and affine transformations for optical quadrature microscopy using CUDA

A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs

Speeding up subset seed algorithm for intensive protein sequence comparison

Local Search Algorithms on Graphics Processing Units. A Case Study: The Permutation Perceptron Problem

Accelerating Euler Equations Numerical Solver on Graphics Processing Units

Real-time Rendering of Heterogeneous Translucent Objects with Arbitrary Shapes

Image-Space GPU Metaballs for Time-Dependent Particle Data Sets

PNG1 triangles for tangent plane continuous surfaces on the GPU

Population Parallel GP on the G80 GPU

A SIMD Interpreter for Genetic Programming on GPU Graphics Cards

Single-particle 3D reconstruction from cryo-electron microscopy images on GPU

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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