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Experiences Porting a Molecular Dynamics Code to GPUs on a Cray XK7

Donald K. Berry, Joseph Schuchart, Robert Henschel

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Tags: CUDA, Fortran, Molecular dynamics, MPI, nVidia, OpenACC, Physics, Tesla K20

December 19, 2013 by hgpu

A Data-Driven Model for Anisotropic Heterogeneous Subsurface Scattering

Ying Song, Wencheng Wang

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Tags: 3D Graphics and Realism, Computer science, CUDA, Factorization, nVidia, nVidia GeForce GTX 480

December 19, 2013 by hgpu

A Two-stage Query by Singing/Humming System on GPU

Wei-Tsa Kao, Chung-Che Wang, Kaichun K. Chang, Jyh-Shing Roger Jang, Wenshan Liou

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Tags: Computer science, CUDA, Databases, nVidia, nVidia GeForce GTX 660 Ti

December 19, 2013 by hgpu

Heterogeneous Programming with Single Operation Multiple Data

Herve Paulino, Eduardo Marques

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Tags: Computer science, CUDA, Data parallelism, Heterogeneous systems, Java, nVidia, nVidia GeForce GT 320 M, Tesla C2050

December 19, 2013 by hgpu

Fast Image Alignment with Fourier Moment Matching on GPU

Hong-Ren Su, Hao-Yuan Kuo, Shang-Hong Lai, Chin-Chia Wu

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Tags: CUDA, Image alignment, Image processing, nVidia, nVidia GeForce GT 630 M, nVidia GeForce GTX 650

December 18, 2013 by hgpu

Efficient Multi-GPU Computation of All-Pairs Shortest Paths

Hristo Djidjev, Sunil Thulasidasan, Guillaume Chapuis, Rumen Andonov, Dominique Lavenier

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Tags: Algorithms, Bioinformatics, Biology, CUDA, GPU cluster, nVidia, Tesla C2090

December 18, 2013 by hgpu

A comparative analysis of the performance and deployment overhead of parallelized Finite Difference Time Domain (FDTD) algorithms on a selection of high performance multiprocessor computing systems

Robert Georg Ilgner

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Tags: Algorithms, CUDA, Electrodynamics, FDTD, Finite difference, Finite-difference time-domain, nVidia, nVidia GeForce GTX 480, Tesla C2070, Thesis

December 18, 2013 by hgpu

GPU Accelerated Semiclassical Initial Value Representation Molecular Dynamics

Dario Tamascelli, Francesco S. Dambrosio, Riccardo Conte, Michele Ceotto

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, Physics, Tesla C2075, Tesla K20

December 18, 2013 by hgpu

Development methodologies for GPU and cluster of GPUs

Sylvain Contassot-Vivier, Stephane Vialle, Jens Gustedt

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Tags: Computer science, CUDA, GPU cluster, nVidia, nVidia GeForce GTX 480, nVidia GeForce GTX 580

December 17, 2013 by hgpu

High Performance Computing Image Analysis for Radiotherapy Planning

Zilong Pan

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Tags: Computed tomography, CT, CUDA, Filtering, Medicine, nVidia, Radiotherapy, Tesla C2050, Thesis, Tomography

December 17, 2013 by hgpu

Parallel Firewalls on General-Purpose Graphics Processing Units

Kamal Chandra Reddy, Ankit Tharwani, Ch.Vamshi Krishna, Lakshminarayanan.V

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Tags: Computer science, CUDA, Databases, Network communications, nVidia, nVidia Quadro FX 1700, Security

December 17, 2013 by hgpu

Exploiting parallel features of modern computer architectures in bioinformatics

Guillaume Chapuis

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Tags: Algorithms, Bioinformatics, Biology, CUDA, Genetics, nVidia, Path problems, Tesla C2050, Tesla C2090, Thesis

December 16, 2013 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Experiences Porting a Molecular Dynamics Code to GPUs on a Cray XK7

A Data-Driven Model for Anisotropic Heterogeneous Subsurface Scattering

A Two-stage Query by Singing/Humming System on GPU

Heterogeneous Programming with Single Operation Multiple Data

Fast Image Alignment with Fourier Moment Matching on GPU

Efficient Multi-GPU Computation of All-Pairs Shortest Paths

A comparative analysis of the performance and deployment overhead of parallelized Finite Difference Time Domain (FDTD) algorithms on a selection of high performance multiprocessor computing systems

GPU Accelerated Semiclassical Initial Value Representation Molecular Dynamics

Development methodologies for GPU and cluster of GPUs

High Performance Computing Image Analysis for Radiotherapy Planning

Parallel Firewalls on General-Purpose Graphics Processing Units

Exploiting parallel features of modern computer architectures in bioinformatics

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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