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Bioinformatics Sequence Comparisons on Manycore Processors

Tuan Tu Tran

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Tags: ATI, ATI Radeon HD 5870, Bioinformatics, Biology, nVidia, nVidia GeForce GTX 480, OpenCL, Review, Sequence matching, Thesis

December 25, 2012 by hgpu

Enhancing and Porting the HPC-Lab Snow Simulator to OpenCL on Mobile Platforms

Frederik Magnus Johansen Vestre

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Tags: ATI, ATI Radeon HD 5870, ATI Radeon HD 6490 M, Computer science, nVidia, nVidia GeForce GTX 560 Ti, OpenCL, Sorting, Thesis

November 24, 2012 by hgpu

Pattern Recognition with OpenCL Heterogeneous Platform

Jordan Vrtanoski, Toni Draganov Stojanovski

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Tags: Algorithms, ATI, ATI Radeon HD 5870, Computer science, Heterogeneous systems, Neural networks, OpenCL, Pattern recognition

November 21, 2012 by hgpu

Auto-tunable GPU BLAS (thesis)

Geir Josten Lien

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Tags: ATI, ATI Radeon HD 5870, Benchmarking, Computer science, MPI, nVidia, nVidia GeForce GTX 570, OpenCL, Package, Tesla C2050, Thesis

November 18, 2012 by hgpu

CUDA and OpenCL Implementations of 3D CT Reconstruction for Biomedical Imaging

Saoni Mukherjee, Nicholas Moore, James Brock, Miriam Leeser

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Tags: ATI, ATI Radeon HD 5870, Computed tomography, CT, CUDA, Heterogeneous systems, Image reconstruction, Medicine, nVidia, OpenCL, Tesla C2070

November 16, 2012 by hgpu

Device specialization in heterogeneous multi-GPU environments

Gabriele Cocco, Antonio Cisternino

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Tags: AMD Fusion, ATI, ATI IL, ATI Radeon HD 5870, Computer science, GPU cluster, Heterogeneous systems, Task scheduling

November 15, 2012 by hgpu

Real-Time Surface Extraction and Visualization of Medical Images using OpenCL and GPUs

Erik Smistad, Anne C. Elster, Frank Lindseth

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Tags: ATI, ATI Radeon HD 5870, Medicine, nVidia, nVidia GeForce GTX 470, OpenCL, Package, Tesla C2070, Visualization

November 14, 2012 by hgpu

Characterization and Exploitation of GPU Memory Systems

Kenneth Sydney Lee

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Tags: AMD Fusion, ATI, ATI Radeon HD 5870, ATI Radeon HD 7970, Computer science, Memory model, nVidia, nVidia GeForce GTX 280, OpenCL, Performance, Tesla C2075, Thesis

October 30, 2012 by hgpu

An Environment to Support GPU and Multicore Programming for Rapid, High Performance, Application Deployment

James Laurence Brock

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Tags: ATI, ATI Radeon HD 5870, Computer science, CUDA, Heterogeneous systems, Image reconstruction, Monte Carlo simulation, nVidia, nVidia GeForce 9800 GX2, nVidia GeForce GTX 560 Ti, OpenCL, Tesla C1060, Tesla S1070, Thesis

October 26, 2012 by hgpu

Kinetics of liquid-solid phase transition in large nickel clusters

Alexander V. Yakubovich, Gennady Sushko, Stefan Schramm, Andrey V. Solov'yov

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Tags: ATI, ATI Radeon HD 5870, Computational Physics, Mesoscale and Nanoscale Physics, Molecular dynamics, OpenCL, Phase transition, Physics, Solidification

October 15, 2012 by hgpu

Accelerated protein structure comparison using TM-score-GPU

Ling-Hong Hung, Ram Samudrala

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Tags: ATI, ATI Radeon HD 5870, Bioinformatics, Biology, Clustering, OpenCL, Package

October 5, 2012 by hgpu

Multi2Sim: a simulation framework for CPU-GPU computing

Rafael Ubal, Byunghyun Jang, Perhaad Mistry, Dana Schaa, David Kaeli

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Tags: ATI, ATI Radeon HD 5870, Benchmarking, Computer science, Heterogeneous systems, OpenCL

October 2, 2012 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Bioinformatics Sequence Comparisons on Manycore Processors

Enhancing and Porting the HPC-Lab Snow Simulator to OpenCL on Mobile Platforms

Pattern Recognition with OpenCL Heterogeneous Platform

Auto-tunable GPU BLAS (thesis)

CUDA and OpenCL Implementations of 3D CT Reconstruction for Biomedical Imaging

Device specialization in heterogeneous multi-GPU environments

Real-Time Surface Extraction and Visualization of Medical Images using OpenCL and GPUs

Characterization and Exploitation of GPU Memory Systems

An Environment to Support GPU and Multicore Programming for Rapid, High Performance, Application Deployment

Kinetics of liquid-solid phase transition in large nickel clusters

Accelerated protein structure comparison using TM-score-GPU

Multi2Sim: a simulation framework for CPU-GPU computing

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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