high performance computing on graphics processing units: hgpu.org

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Extremely large scale simulation of a Kardar-Parisi-Zhang model using graphics cards

Jefrrey Kelling, Geza Odor

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Tags: Algorithms, Computational Physics, Condensed matter, CUDA, Finite size scaling, nVidia, Physics

November 1, 2011 by hgpu

A near real-time framework for extracting tip-sample forces in dynamic atomic force microscopy (dAFM)

David Busch, Qingze Zou, Baskar Ganapathysubramanian

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Tags: Condensed matter, CUDA, Materials Science, nVidia, nVidia Quadro FX 5800, Physics

September 5, 2011 by hgpu

Massively parallelized replica-exchange simulations of polymers on GPUs

Jonathan Gross, Wolfhard Janke, Michael Bachmann

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Tags: Biomolecules, Computational Physics, Condensed matter, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Physics, Polymer Systems, Tesla C1060

July 19, 2011 by hgpu

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Takashi Uneyama

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Tags: Condensed matter, CUDA, nVidia, Physics, Soft Condensed Matter, Tesla C1060

June 16, 2011 by hgpu

Performance Acceleration of Kernel Polynomial Method Applying Graphics Processing Units

Shixun Zhang, Shinichi Yamagiwa, Masahiko Okumura, Seiji Yunoki

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Tags: Computational Physics, Condensed matter, CUDA, nVidia, Performance, Physics, Tesla C2050

May 30, 2011 by hgpu

Anomalous Structure and Scaling of Ring Polymer Brushes

Daniel Reith, Andrey Milchev, Peter Virnau, Kurt Binder

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Tags: Condensed matter, Materials Science, nVidia, nVidia GeForce GTX 480, Physics, Soft Condensed Matter, Statistical Mechanics

April 29, 2011 by hgpu

Benchmarking GPU and CPU codes for Heisenberg spin glass overrelaxation

M. Bernaschi, G. Parisi, L. Parisi

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Tags: Condensed matter, CUDA, nVidia, nVidia GeForce GTX 480, Package, Physics, Spin Systems, Tesla C1060, Tesla C2050

March 9, 2011 by hgpu

General-purpose molecular dynamics simulations on GPU-based clusters

Christian R. Trott, Lars Winterfeld, Paul S. Crozier

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Tags: Computational Physics, Condensed matter, CUDA, GPU cluster, Materials Science, Molecular dynamics, MPI, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 295, Package, Performance, Physics, Tesla C1060, Tesla S1070

March 8, 2011 by hgpu

Fast computing of scattering maps of nanostructures using graphical processing units

Vincent Favre-Nicolin, Johann Coraux, Marie-Ingrid Richard, Hubert Renevier

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Tags: Condensed matter, CUDA, Materials Science, Mesoscale and Nanoscale Physics, nVidia, nVidia GeForce GTX 295, Package, Physics, Python

February 11, 2011 by hgpu

High-precision molecular dynamics simulation of UO2-PuO2: superionic transition in uranium dioxide

S.I. Potashnikov, A.S. Boyarchenkov, K.A. Nekrasov, A.Ya. Kupryazhkin

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Tags: Condensed matter, CUDA, Materials Science, Molecular dynamics, nVidia, Physics

February 9, 2011 by hgpu

High-precision molecular dynamics simulation of UO2-PuO2: pair potentials comparison

S.I. Potashnikov, A.S. Boyarchenkov, K.A. Nekrasov, A.Ya. Kupryazhkin

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Tags: Condensed matter, CUDA, Materials Science, Molecular dynamics, nVidia, Physics

February 9, 2011 by hgpu

Density Functional Theory calculation on many-cores hybrid CPU-GPU architectures

Luigi Genovese, Matthieu Ospici, Thierry Deutsch, Jean-Francois Mehaut, Alexey Neelov, Stefan Goedecker

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Tags: Computational Physics, Condensed matter, CUDA, Materials Science, nVidia, Physics, Tesla S1070

November 13, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Extremely large scale simulation of a Kardar-Parisi-Zhang model using graphics cards

A near real-time framework for extracting tip-sample forces in dynamic atomic force microscopy (dAFM)

Massively parallelized replica-exchange simulations of polymers on GPUs

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Performance Acceleration of Kernel Polynomial Method Applying Graphics Processing Units

Anomalous Structure and Scaling of Ring Polymer Brushes

Benchmarking GPU and CPU codes for Heisenberg spin glass overrelaxation

General-purpose molecular dynamics simulations on GPU-based clusters

Fast computing of scattering maps of nanostructures using graphical processing units

High-precision molecular dynamics simulation of UO2-PuO2: superionic transition in uranium dioxide

High-precision molecular dynamics simulation of UO2-PuO2: pair potentials comparison

Density Functional Theory calculation on many-cores hybrid CPU-GPU architectures

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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