high performance computing on graphics processing units: hgpu.org

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Extremely large scale simulation of a Kardar-Parisi-Zhang model using graphics cards

Jefrrey Kelling, Geza Odor

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Tags: Algorithms, Computational Physics, Condensed matter, CUDA, Finite size scaling, nVidia, Physics

November 1, 2011 by hgpu

A near real-time framework for extracting tip-sample forces in dynamic atomic force microscopy (dAFM)

David Busch, Qingze Zou, Baskar Ganapathysubramanian

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Tags: Condensed matter, CUDA, Materials Science, nVidia, nVidia Quadro FX 5800, Physics

September 5, 2011 by hgpu

Massively parallelized replica-exchange simulations of polymers on GPUs

Jonathan Gross, Wolfhard Janke, Michael Bachmann

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Tags: Biomolecules, Computational Physics, Condensed matter, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Physics, Polymer Systems, Tesla C1060

July 19, 2011 by hgpu

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Takashi Uneyama

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Tags: Condensed matter, CUDA, nVidia, Physics, Soft Condensed Matter, Tesla C1060

June 16, 2011 by hgpu

Performance Acceleration of Kernel Polynomial Method Applying Graphics Processing Units

Shixun Zhang, Shinichi Yamagiwa, Masahiko Okumura, Seiji Yunoki

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Tags: Computational Physics, Condensed matter, CUDA, nVidia, Performance, Physics, Tesla C2050

May 30, 2011 by hgpu

Anomalous Structure and Scaling of Ring Polymer Brushes

Daniel Reith, Andrey Milchev, Peter Virnau, Kurt Binder

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Tags: Condensed matter, Materials Science, nVidia, nVidia GeForce GTX 480, Physics, Soft Condensed Matter, Statistical Mechanics

April 29, 2011 by hgpu

Benchmarking GPU and CPU codes for Heisenberg spin glass overrelaxation

M. Bernaschi, G. Parisi, L. Parisi

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Tags: Condensed matter, CUDA, nVidia, nVidia GeForce GTX 480, Package, Physics, Spin Systems, Tesla C1060, Tesla C2050

March 9, 2011 by hgpu

General-purpose molecular dynamics simulations on GPU-based clusters

Christian R. Trott, Lars Winterfeld, Paul S. Crozier

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Tags: Computational Physics, Condensed matter, CUDA, GPU cluster, Materials Science, Molecular dynamics, MPI, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 295, Package, Performance, Physics, Tesla C1060, Tesla S1070

March 8, 2011 by hgpu

Fast computing of scattering maps of nanostructures using graphical processing units

Vincent Favre-Nicolin, Johann Coraux, Marie-Ingrid Richard, Hubert Renevier

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Tags: Condensed matter, CUDA, Materials Science, Mesoscale and Nanoscale Physics, nVidia, nVidia GeForce GTX 295, Package, Physics, Python

February 11, 2011 by hgpu

High-precision molecular dynamics simulation of UO2-PuO2: superionic transition in uranium dioxide

S.I. Potashnikov, A.S. Boyarchenkov, K.A. Nekrasov, A.Ya. Kupryazhkin

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Tags: Condensed matter, CUDA, Materials Science, Molecular dynamics, nVidia, Physics

February 9, 2011 by hgpu

High-precision molecular dynamics simulation of UO2-PuO2: pair potentials comparison

S.I. Potashnikov, A.S. Boyarchenkov, K.A. Nekrasov, A.Ya. Kupryazhkin

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Tags: Condensed matter, CUDA, Materials Science, Molecular dynamics, nVidia, Physics

February 9, 2011 by hgpu

Density Functional Theory calculation on many-cores hybrid CPU-GPU architectures

Luigi Genovese, Matthieu Ospici, Thierry Deutsch, Jean-Francois Mehaut, Alexey Neelov, Stefan Goedecker

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Tags: Computational Physics, Condensed matter, CUDA, Materials Science, nVidia, Physics, Tesla S1070

November 13, 2010 by hgpu

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

Shamrock: Multi-GPU hydrodynamics for astrophysics

The Shamrock code: I- Smoothed Particle Hydrodynamics on GPUs

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

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high performance computing on graphics processing units: hgpu.org

Extremely large scale simulation of a Kardar-Parisi-Zhang model using graphics cards

A near real-time framework for extracting tip-sample forces in dynamic atomic force microscopy (dAFM)

Massively parallelized replica-exchange simulations of polymers on GPUs

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Performance Acceleration of Kernel Polynomial Method Applying Graphics Processing Units

Anomalous Structure and Scaling of Ring Polymer Brushes

Benchmarking GPU and CPU codes for Heisenberg spin glass overrelaxation

General-purpose molecular dynamics simulations on GPU-based clusters

Fast computing of scattering maps of nanostructures using graphical processing units

High-precision molecular dynamics simulation of UO2-PuO2: superionic transition in uranium dioxide

High-precision molecular dynamics simulation of UO2-PuO2: pair potentials comparison

Density Functional Theory calculation on many-cores hybrid CPU-GPU architectures

Recent source codes

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

Shamrock: Multi-GPU hydrodynamics for astrophysics

LLMPerf: GPU Performance Modeling meets Large Language Models

Hercules: A Compiler for Productive Programming of Heterogeneous Systems

Celerity Runtime: High-level C++ for Accelerator Clusters

wgpy: WebGL accelerated numpy-compatible array library for web browser

Microbenchmarking OpenMP target offload with Catch2

SUperman: Highly Efficient Permanent Computation Library

TransCL: An Automatic CUDA-to-OpenCL Programs Transformation Framework

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