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Scalable Applications on Heterogeneous System Architectures: A Systematic Performance Analysis Framework

Robert Dietrich

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Tags: Computer science, CUDA, Data acquisition, Heterogeneous systems, MPI, nVidia, OpenACC, OpenCL, Tesla K80, Tesla V100, Thesis

December 1, 2019 by hgpu

waLBerla: A block-structured high-performance framework for multiphysics simulations

Martin Bauer, Sebastian Eibl, Christian Godenschwager, Nils Kohl, Michael Kuron, Christoph Rettinger, Florian Schornbaum, Christoph Schwarzmeier, Dominik Thönnes, Harald Köstler, Ulrich Rüde

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Tags: Code generation, CUDA, Heterogeneous systems, Lattice Boltzmann model, MPI, nVidia, Package, Particle simulation, performance portability, Physics, Tesla P100

October 6, 2019 by hgpu

ArborX: A Performance Portable Search Library

D. Lebrun-Grandie, A. Prokopenko, B. Turcksin, S. R. Slattery

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Tags: Algorithms, Computer science, CUDA, Mathematical Software, MPI, OpenMP, Package, performance portability

September 8, 2019 by hgpu

A Comparative Study of Asynchronous Many-Tasking Runtimes: Cilk, Charm++, ParalleX and AM++

Abhishek Kulkarni, Andrew Lumsdaine

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Tags: Computer science, HPC, MPI

April 20, 2019 by hgpu

cuSten – CUDA Finite Difference and Stencil Library

Andrew Gloster, Lennon O'Naraigh

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Tags: Computational Physics, Computer science, CUDA, Finite difference, MPI, nVidia, nVidia GeForce GTX Titan X, Package, PDEs

March 3, 2019 by hgpu

Heterogeneous Distributed Big Data Clustering on Sparse Grids

David Pfander, Gregor Daiss, Dirk Pfluger

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Tags: Clustering, Computer science, Data mining, Distributed computing, Heterogeneous systems, Machine learning, MPI, nVidia, OpenCL, Package, performance portability, Tesla P100

February 10, 2019 by hgpu

Exploiting OpenMP & OpenACC to Accelerate a Molecular Docking Mini-App in Heterogeneous HPC Nodes

Emanuele Vitali, Davide Gadioli, Gianluca Palermo, Andrea Beccari, Carlo Cavazzoni, Cristina Silvano

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Tags: Computer science, CUDA, Heterogeneous systems, HPC, molecular docking, MPI, nVidia, OpenACC, OpenMP, Tesla K80

January 27, 2019 by hgpu

Automatic Performance Optimization on Heterogeneous Computer Systems using Manycore Coprocessors

Chenggang Lai

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Tags: Computer science, Heterogeneous systems, Intel Xeon Phi, MPI, OpenMP, Thesis

December 30, 2018 by hgpu

Targeting GPUs with OpenMP Directives on Summit: A Simple and Effective Fortran Experience

Reuben D. Budiardja, Christian Y. Cardall

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Tags: cfd, CUDA, Fluid dynamics, Fortran, MPI, nVidia, OpenMP, Package, Physics, Tesla V100

December 23, 2018 by hgpu

Dense and sparse parallel linear algebra algorithms on graphics processing units

Alejandro Lamas Davina

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Tags: Algorithms, Computer science, CUDA, Linear Algebra, MPI, nVidia, Sparse, Tesla K20, Tesla M2090, Thesis

November 25, 2018 by hgpu

StePS: A Multi-GPU Cosmological N-body Code for Compactified Simulations

Gabor Racz, Istvan Szapudi, Laszlo Dobos, Istvan Csabai, Alexander S. Szalay

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Tags: Astrophysics, Cosmology, CUDA, MPI, N-body simulation, nVidia, OpenMP, Package, Tesla K80

November 18, 2018 by hgpu

Scalable Distributed DNN Training using TensorFlow and CUDA-Aware MPI: Characterization, Designs, and Performance Evaluation

Ammar Ahmad Awan, Jeroen Bedorf, Ching-Hsiang Chu, Hari Subramoni, Dhabaleswar K. Panda

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Tags: Computer science, CUDA, Deep learning, Distributed computing, MPI, nVidia, TensorFlow, Tesla K80

November 3, 2018 by hgpu

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

PyOMP: Parallel programming for CPUs and GPUs with OpenMP and Python

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

Understanding GEMM Performance and Energy on NVIDIA Ada Lovelace: A Machine Learning-Based Analytical Approach

HiRep

Scaling SU(2) to 1000 GPUs using HiRep

Gaia AVU-GSR

Performance portability via C++ PSTL, SYCL, OpenMP, and HIP: the Gaia AVU-GSR case study

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

gpuPairHMM: High-speed Pair-HMM Forward Algorithm for DNA Variant Calling on GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Scalable Applications on Heterogeneous System Architectures: A Systematic Performance Analysis Framework

waLBerla: A block-structured high-performance framework for multiphysics simulations

ArborX: A Performance Portable Search Library

A Comparative Study of Asynchronous Many-Tasking Runtimes: Cilk, Charm++, ParalleX and AM++

cuSten – CUDA Finite Difference and Stencil Library

Heterogeneous Distributed Big Data Clustering on Sparse Grids

Exploiting OpenMP & OpenACC to Accelerate a Molecular Docking Mini-App in Heterogeneous HPC Nodes

Automatic Performance Optimization on Heterogeneous Computer Systems using Manycore Coprocessors

Targeting GPUs with OpenMP Directives on Summit: A Simple and Effective Fortran Experience

Dense and sparse parallel linear algebra algorithms on graphics processing units

StePS: A Multi-GPU Cosmological N-body Code for Compactified Simulations

Scalable Distributed DNN Training using TensorFlow and CUDA-Aware MPI: Characterization, Designs, and Performance Evaluation

Recent source codes

tdg-benchs: benchmarks used to test the performance of taskgraph

SW#SYCL

LLOR: Automatic Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

GPPerf: Energy-Aware GPU Performance Prediction and Optimization Framework

HiRep

Gaia AVU-GSR

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

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