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Heterogeneous Parallelization and Acceleration of Molecular Dynamics Simulations in GROMACS

Szilárd Páll, Artem Zhmurov, Paul Bauer, Mark Abraham, Magnus Lundborg, Alan Gray, Berk Hess, Erik Lindahl

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Tags: Algorithms, AMD Radeon Instinct Mi50, AMD Vega FE, ATI, Chemistry, CUDA, Heterogeneous systems, Molecular dynamics, MPI, nVidia, nVidia GeForce RTX 2080, nVidia Quadro P 6000, OpenCL, Package, Tesla V100

June 21, 2020 by hgpu

Understanding GPU-Based Lossy Compression for Extreme-Scale Cosmological Simulations

Sian Jin, Pascal Grosset, Christopher M. Biwer, Jesus Pulido, Jiannan Tian, Dingwen Tao, James Ahrens

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Tags: Astrophysics, Compression, Computational Physics, Cosmology, CUDA, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 1080 Ti, nVidia GeForce GTX Titan V, nVidia GeForce RTX 2080 Ti, nVidia Quadro P 6000, Package, Physics, Tesla K80, Tesla P100, Tesla V100

April 5, 2020 by hgpu

Optimization of a discontinuous finite element solver with OpenCL and StarPU

Philippe Helluy, Laura Mendoza, Bruno Weber

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Tags: Algorithms, Computer science, Hybrid computing, nVidia, nVidia GeForce GTX 1050 Ti, nVidia Quadro P 6000, OpenCL, Package, Task scheduling

December 9, 2018 by hgpu

cuSZ: CUDA-Based Error-Bounded Lossy Compressor for Scientific Data

A Novel Memory-Efficient Deep Learning Training Framework via Error-Bounded Lossy Compression

Ginkgo: a high-performance linear algebra library for manycore systems

Ginkgo – A Math Library designed for Platform Portability

GPURepair

GPURepair: Automated Repair of GPU Kernels

Dazmir

Adaptive Data Migration in Load-Imbalanced HPC Applications

ACA-project

Runtime Performances Benchmark for Knowledge Graph Embedding Methods

TornadoVM

Transparent Compiler and Runtime Specializations for Accelerating Managed Languages on FPGAs

AMGCL

AMGCL – A C++ library for efficient solution of large sparse linear systems

Tinker-HP: High Performance Multi-GPUs Massively Parallel Evolution of Tinker

Tinker-HP: Accelerating Molecular Dynamics Simulations of Large Complex Systems with Advanced Point Dipole Polarizable Force Fields using GPUs and Multi-GPUs systems

EngineCL: Usability and Performance in Heterogeneous Computing

Towards Co-execution on Commodity Heterogeneous Systems: Optimizations for Time-Constrained Scenarios

Neural Network Libraries

Out-of-core Training for Extremely Large-Scale Neural Networks With Adaptive Window-Based Scheduling

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2020

December

10-14

Virtually in Barcelona, Spain

The 18th International Conference on High Performance Computing & Simulation (HPCS), 2020

2020

November

24-27

Naha, Okinawa, Japan

The Fifth International Workshop on GPU Computing and AI (GCA), 2020

2021

January

13-15

Shenzhen, China

2nd International Conference on Frontiers of Intelligent Manufacturing and Automation (CFIMA’21), 2021

2020

December

14-16

Bangkok, Thailand

International Conference on Cyber Physical Systems and IoT (CPSIOT’20), 2020

2020

December

14-16

Bangkok, Thailand

International Conference on Wireless Networks and Embedded Systems (ICWNES’20), 2020

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