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Implementation of Smith-Waterman Algorithm in OpenCL for GPUs

Dzmitry Razmyslovich, Guillermo Marcus, Markus Gipp, Marc Zapatka, Andreas Szillus

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 480, OpenCL, Poster, Sequence alignment, Smith-Waterman algorithm

March 31, 2011 by hgpu

OpenCL embedded profile prototype in mobile device

J. Leskela, J. Nikula, M. Salmela

Tags: Image processing, OpenCL

March 31, 2011 by hgpu

Evaluation Framework for GPU Performance Based on OpenCL Standard

M. Jurecko, J. Kocisova, J. Busa, T. Kasanicky, M. Domiter, M. Zvada

Tags: ATI, Computer science, GPU cluster, nVidia, OpenCL, Performance

March 31, 2011 by hgpu

CUDACL: A tool for CUDA and OpenCL programmers

Ferosh Jacob, David Whittaker, Sagar Thapaliya, Purushotham Bangalore, Marjan Mernik, Jeff Gray

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Tags: Computer science, CUDA, High-level Languages, Java, nVidia, nVidia GeForce GTX 260, OpenCL

March 31, 2011 by hgpu

Exploiting SIMD extensions for linear image processing with OpenCL

S. Antao, L. Sousa

Tags: Image processing, OpenCL, Optimization

March 31, 2011 by hgpu

OpenCL – An effective programming model for data parallel computations at the Cell Broadband Engine

J. Breitbart, C. Fohry

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Tags: Cell processor, Computer science, CUDA, Memory model, nVidia, nVidia GeForce GTX 280, OpenCL

March 31, 2011 by hgpu

OpenCL and parallel primitives for digital TV applications

S. M. Cho, D. W. Im, O. Y. Jang, H. J. Song, B. D. Paulovicks, V. Sheinin, H. Yeo

Tags: Cell processor, Computer science, OpenCL

March 30, 2011 by hgpu

OpenCL: Make Ubiquitous Supercomputing Possible

Slo-Li Chu, Chih-Chieh Hsiao

Tags: Computer science, OpenCL, OpenMP

March 30, 2011 by hgpu

Accelerated cone beam CT reconstruction based on OpenCL

Bo Wang; Lei Zhu, Kebin Jia, Jie Zheng

Tags: Computed tomography, CT, Image processing, Image reconstruction, OpenCL

March 30, 2011 by hgpu

OpenCL-based design methodology for application-specific processors

Pekka O. Jaaskelainen, Carlos S. de La Lama, Pablo Huerta, Jarmo H. Takala

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Tags: AES, Computer science, FPGA, MPI, OpenCL, Security

March 30, 2011 by hgpu

Hybrid OpenCL over high speed networks

Ryo Aoki, Shuichi Oikawa, Ryoji Tsuchiyama, Takashi Nakamura

Tags: Computer science, Heterogeneous systems, OpenCL

March 30, 2011 by hgpu

Improving Hybrid OpenCL Performance by High Speed Networks

Ryo Aoki, Shuichi Oikawa, Ryoji Tsuchiyama, Takashi Nakamura

Tags: Computer science, Heterogeneous systems, OpenCL

March 30, 2011 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

Implementation of Smith-Waterman Algorithm in OpenCL for GPUs

OpenCL embedded profile prototype in mobile device

Evaluation Framework for GPU Performance Based on OpenCL Standard

CUDACL: A tool for CUDA and OpenCL programmers

Exploiting SIMD extensions for linear image processing with OpenCL

OpenCL – An effective programming model for data parallel computations at the Cell Broadband Engine

OpenCL and parallel primitives for digital TV applications

OpenCL: Make Ubiquitous Supercomputing Possible

Accelerated cone beam CT reconstruction based on OpenCL

OpenCL-based design methodology for application-specific processors

Hybrid OpenCL over high speed networks

Improving Hybrid OpenCL Performance by High Speed Networks

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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