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Accelerating molecular dynamic simulation on graphics processing units

Mark S. Friedrichs, Peter Eastman, Vishal Vaidyanathan, Mike Houston, Scott Legrand, Adam L. Beberg, Daniel L. Ensign, Christopher M. Bruns, Vijay S. Pande

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Source codes

Tags: ATI, ATI Radeon HD 4870, ATI Stream, Biology, Brook, Chemistry, Computational chemistry, Molecular dynamics, nVidia, nVidia GeForce GTX 280, Package, Solvent effects

October 30, 2010 by hgpu

Visualization and GPU-accelerated simulation of medical ultrasound from CT images

Oliver Kutter, Ramtin Shams, Nassir Navab

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Tags: ATI, ATI Radeon 1950 PRO, Computer science, GLSL, Medicine, nVidia, nVidia Quadro FX 3600 M, nVidia Quadro FX 5600, OpenGL, Ultrasound, Visualization

October 28, 2010 by hgpu

Fast Simulations of Gravitational Many-body Problem on RV770 GPU

Kazuki Fujiwara, Naohito Nakasato

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Tags: Astrophysics, ATI, ATI CAL, ATI Radeon HD 4850, ATI Radeon HD 4870, ATI Stream, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, RV770

October 28, 2010 by hgpu

Pseudo-random number generators for Monte Carlo simulations on Graphics Processing Units

Vadim Demchik

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Tags: ATI, ATI IL, ATI Radeon HD 4850, ATI Radeon HD 4870, ATI Radeon HD 5850, ATI Stream, Computational Physics, High Energy Physics - Lattice, Monte Carlo simulation, Physics, Pseudo-random number generators

October 28, 2010 by hgpu

GIST: an interactive, GPU-based level set segmentation tool for 3D medical images

Joshua E. Cates, Aaron E. Lefohn, Ross T. Whitaker

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Tags: ATI, ATI Radeon 9700 Pro, Computer science, Image processing, Medicine

October 28, 2010 by hgpu

Real-time mesh simplification using the GPU

Christopher Decoro, Natalya Tatarchuk

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Tags: ATI, Computer science, Mesh decimation, Mesh simplification, Rendering

October 27, 2010 by hgpu

Oct-tree Method on GPU

N. Nakasato

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Tags: Astrophysics, ATI, ATI IL, ATI Stream, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, RV770

October 27, 2010 by hgpu

Techniques for efficient DCT/IDCT implementation on generic GPU

Bo Fang, Guobin Shen, Shipeng Li, Huifang Chen

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Tags: ATI, ATI Radeon 9700 Pro, Computer science, HLSL, Image processing

October 27, 2010 by hgpu

Monte Carlo simulations on Graphics Processing Units

Vadim Demchik, Alexei Strelchenko

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Tags: ATI, ATI IL, ATI Radeon HD 4850, ATI Radeon HD 4870, ATI Stream, High Energy Physics - Lattice, Monte Carlo simulation, Physics

October 27, 2010 by hgpu

Understanding the efficiency of GPU algorithms for matrix-matrix multiplication

K. Fatahalian,J. Sugerman,P. Hanrahan

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Tags: Algorithms, ATI, ATI Radeon 9800 XT, Computer science, Linear Algebra, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce FX 5900 Ultra

October 27, 2010 by hgpu

GPU implementation of neural networks

K. Oh

Tags: ATI, ATI Radeon 9700 Pro, Computer science, Image processing, Neural networks, Text detection

October 27, 2010 by hgpu

ATI Radeon HD 4550

Tags: ATI, ATI Radeon HD 45xx

October 15, 2010 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

Accelerating molecular dynamic simulation on graphics processing units

Visualization and GPU-accelerated simulation of medical ultrasound from CT images

Fast Simulations of Gravitational Many-body Problem on RV770 GPU

Pseudo-random number generators for Monte Carlo simulations on Graphics Processing Units

GIST: an interactive, GPU-based level set segmentation tool for 3D medical images

Real-time mesh simplification using the GPU

Oct-tree Method on GPU

Techniques for efficient DCT/IDCT implementation on generic GPU

Monte Carlo simulations on Graphics Processing Units

Understanding the efficiency of GPU algorithms for matrix-matrix multiplication

GPU implementation of neural networks

ATI Radeon HD 4550

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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