high performance computing on graphics processing units: hgpu.org

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hgpu.org » Applications » Physics

Simulation of reaction-diffusion processes in three dimensions using CUDA

Ferenc Molnar Jr., Ferenc Izsak, Robert Meszaros, Istvan Lagzi

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Tags: Computational Physics, CUDA, Diffusion equation, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 275, Pattern formation, Physics

November 11, 2010 by hgpu

High-performance astrophysical visualization using Splotch

Zhefan Jin, Mel Krokos, Marzia Rivi, Claudio Gheller, Klaus Dolag, Martin Reinecke

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, MPI, nVidia, nVidia Quadro FX 5600, Visualization

November 11, 2010 by hgpu

Magnetohydrodynamics on Heterogeneous architectures: a performance comparison

Bijia Pang, Ue-li Pen, Michael Perrone

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Tags: Astrophysics, ATI, ATI Radeon HD 5870, Cell processor, Computational Physics, CUDA, Electrodynamics, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 260, OpenCL, OpenMP, Performance

November 11, 2010 by hgpu

CUDA simulations of active dumbbell suspensions

Victor Putz, Jorn Dunkel, Julia M. Yeomans

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Tags: Condensed matter, CUDA, nVidia, nVidia GeForce GTX 295, Physics, Soft Condensed Matter, Tesla C1060

November 11, 2010 by hgpu

Reionization simulations powered by GPUs I: the structure of the Ultraviolet radiation field

Dominique Aubert, Romain Teyssier

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Tags: Astrophysics, Computational Physics, Cosmology and Extragalactic Astrophysics, CUDA, GPU cluster, MPI, nVidia, Tesla C1060

November 11, 2010 by hgpu

Ultra-fast treatment plan optimization for volumetric modulated arc therapy (VMAT)

Chunhua Men, H. Edwin Romeijn, Xun Jia, Steve B. Jiang

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Tags: CUDA, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 11, 2010 by hgpu

MYRIAD: A new N-body code for simulations of Star Clusters

Simos Konstantinidis, Kostas D. Kokkotas

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Tags: Astrophysics, Galaxy Astrophysics, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, Package, Tesla C1060

November 11, 2010 by hgpu

Toward large-scale Hybrid Monte Carlo simulations of the Hubbard model on graphics processing units

Kyle A. Wendt, Joaquin E. Drut, Timo A. Lahde

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Tags: Computational Physics, Condensed matter, CUDA, Monte Carlo simulation, nVidia, Physics, Statistical Mechanics, Tesla C1060

November 11, 2010 by hgpu

QYMSYM: A GPU-Accelerated Hybrid Symplectic Integrator That Permits Close Encounters

Alexander Moore, Alice C. Quillen

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Tags: Astrophysics, Celestial mechanics, CUDA, Earth and Planetary Astrophysics, Instrumentation and Methods for Astrophysics, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package

November 10, 2010 by hgpu

Interactive Visualization of the Largest Radioastronomy Cubes

A.H. Hassan, C.J. Fluke, D.G. Barnes

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Tags: Astrophysics, CUDA, Instrumentation and Methods for Astrophysics, MPI, nVidia, nVidia GeForce GTX 285

November 10, 2010 by hgpu

A GPU implementation of a track-repeating algorithm for proton radiotherapy dose calculations

Pablo P Yepes, Dragan Mirkovic, Phillip J Taddei

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Tags: CUDA, Medical Physics, Medicine, Monte Carlo simulation, Nuclear Experiment, nVidia, nVidia GeForce GTX 295, Physics, Proton radiotherapy

November 10, 2010 by hgpu

GPU-based Iterative Cone Beam CT Reconstruction Using Tight Frame Regularization

Xun Jia, Bin Dong, Yifei Lou, Steve B. Jiang

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Tags: Computed tomography, CUDA, Medical Physics, Medicine, nVidia, Physics, Tesla C1060

November 10, 2010 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

Simulation of reaction-diffusion processes in three dimensions using CUDA

High-performance astrophysical visualization using Splotch

Magnetohydrodynamics on Heterogeneous architectures: a performance comparison

CUDA simulations of active dumbbell suspensions

Reionization simulations powered by GPUs I: the structure of the Ultraviolet radiation field

Ultra-fast treatment plan optimization for volumetric modulated arc therapy (VMAT)

MYRIAD: A new N-body code for simulations of Star Clusters

Toward large-scale Hybrid Monte Carlo simulations of the Hubbard model on graphics processing units

QYMSYM: A GPU-Accelerated Hybrid Symplectic Integrator That Permits Close Encounters

Interactive Visualization of the Largest Radioastronomy Cubes

A GPU implementation of a track-repeating algorithm for proton radiotherapy dose calculations

GPU-based Iterative Cone Beam CT Reconstruction Using Tight Frame Regularization

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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