high performance computing on graphics processing units: hgpu.org

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GPU Simulation and Rendering of Volumetric Effects for Computer Games and Virtual Environments

Jens Kruger, Rudiger Westermann

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Tags: 3D Graphics and Realism, ATI, ATI Radeon X800 XT, Computer science, Numerical simulation, nVidia, nVidia GeForce 6800 GT, OpenGL, Raytracing, Rendering

November 1, 2010 by hgpu

Fast parallel Particle-To-Grid interpolation for plasma PIC simulations on the GPU

G. Stantchev, W. Dorland, N. Gumerov

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Tags: Computer science, CUDA, Numerical simulation, nVidia, Particle-in-cell methods, Plasma physics

November 1, 2010 by hgpu

GPU Accelerated Smith-Waterman

Yang Liu, Wayne Huang, John Johnson, Sheila Vaidya

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Tags: Bioinformatics, Biology, Computational biology, Computer science, GLSL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Smith-Waterman algorithm

November 1, 2010 by hgpu

CUDA-Lite: Reducing GPU programming complexity

Sain-zee Ueng, Melvin Lathara, Sara S. Baghsorkhi, Wen-mei W. Hwu

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Programming techniques

November 1, 2010 by hgpu

Program optimization space pruning for a multithreaded gpu

Shane Ryoo, Christopher I. Rodrigues, Sam S. Stone, Sara S. Baghsorkhi, Sain Z. Ueng, John A. Stratton, Wen mei

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Optimization, Performance, Programming techniques

November 1, 2010 by hgpu

Interactive, GPU-Based Level Sets for 3D Segmentation

Aaron Lefohn, Joshua Cates, Ross Whitaker

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Tags: ATI, ATI Radeon 9700 Pro, Image processing, Medicine, OpenGL

November 1, 2010 by hgpu

High-throughput sequence alignment using Graphics Processing Units

Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment

November 1, 2010 by hgpu

Bio-sequence database scanning on a GPU

Weiguo Liu, B. Schmidt, G. Voss, A. Schroder, W. Muller-Wittig

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Tags: Biology, Computational biology, GLSL, nVidia, nVidia GeForce 6800 GTO, nVidia GeForce 7800 GTX, OpenGL, Smith-Waterman algorithm

October 30, 2010 by hgpu

Graphics Processing Units and High-Dimensional Optimization

Hua Zhou, Kenneth Lange, Marc A. Suchard

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Tags: Block relaxation, CUBLAS, CUDA, EM and MM algorithms, Mathematics, Multidimensional scaling, Nonnegative matrix factorization, nVidia, nVidia GeForce GTX 280, PET scanning, Statistics

October 30, 2010 by hgpu

How GPUs Work

David Luebke, Greg Humphreys

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Tags: Computer science, Review

October 30, 2010 by hgpu

GPUs: A Closer Look

Kayvon Fatahalian, Mike Houston

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Tags: Computer science, Review

October 30, 2010 by hgpu

Mapping computational concepts to GPUs

Mark Harris

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Tags: Computer science, Review

October 30, 2010 by hgpu

Code examples for paper on SYCL backend of Kokkos - IWOCL 2024

Experiences with implementing Kokkos’ SYCL backend

ROCm's implementation of Gromacs

GROMACS on AMD GPU-Based HPC Platforms: Using SYCL for Performance and Portability

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

GPU Simulation and Rendering of Volumetric Effects for Computer Games and Virtual Environments

Fast parallel Particle-To-Grid interpolation for plasma PIC simulations on the GPU

GPU Accelerated Smith-Waterman

CUDA-Lite: Reducing GPU programming complexity

Program optimization space pruning for a multithreaded gpu

Interactive, GPU-Based Level Sets for 3D Segmentation

High-throughput sequence alignment using Graphics Processing Units

Bio-sequence database scanning on a GPU

Graphics Processing Units and High-Dimensional Optimization

How GPUs Work

GPUs: A Closer Look

Mapping computational concepts to GPUs

Recent source codes

Code examples for paper on SYCL backend of Kokkos - IWOCL 2024

ROCm's implementation of Gromacs

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

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