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High Performance Hybrid Functional Petri Net Simulations of Biological Pathway Models on CUDA

Georgios Chalkidis, Masao Nagasaki, Satoru Miyano

Tags: Algorithms, Computer science, CUDA, nVidia, Path problems

April 6, 2011 by hgpu

A Hybrid Computational Grid Architecture for Comparative Genomics

A. Singh, Chen Chen, Weiguo Liu, W. Mitchell, B. Schmidt

Tags: Bioinformatics, Biology, Genetics, Sequence alignment

April 6, 2011 by hgpu

Barnes-hut treecode on GPU

Hu Jiang, Qianni Deng

Tags: Algorithms, Computer science, CUDA, N-body simulation, nVidia

April 6, 2011 by hgpu

Parallel and distributed seismic wave field modeling with combined Linux clusters and graphics processing units

T. Danek

Tags: Earth and Space Sciences, Seismic modeling, Seismology

April 6, 2011 by hgpu

Implementation of Ant Colony Algorithm Based on GPU

Wang Jiening, Dong Jiankang, Zhang Chunfeng

Tags: Algorithms, Computer science, Path problems

April 6, 2011 by hgpu

High-speed electromagnetic field simulation by HIE-FDTD method with GPGPU

M. Unno, H. Asai

Tags: CUDA, Electrodynamics, Finite-difference time-domain, nVidia

April 6, 2011 by hgpu

FSimGP^2: An Efficient Fault Simulator with GPGPU

Min Li, M.S. Hsiao

Tags: Algorithms, Computer science, CUDA, Fault simulation, nVidia

April 6, 2011 by hgpu

An implementation and its evaluation of password cracking tool parallelized on GPGPU

T. Murakami, R. Kasahara, T. Saito

Tags: Computer science, CUDA, nVidia, Security

April 5, 2011 by hgpu

Enabling Energy-Efficient Analysis of Massive Neural Signals Using GPGPU

Dan Chen, Lizhe Wang, Shuaiting Wang, Muzhou Xiong, Gregor von Laszewski, Xiaoli Li

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Tags: Biology, CUDA, Medicine, Neuroscience, nVidia, nVidia GeForce GTX 295, Signal processing

April 5, 2011 by hgpu

GPGPU-Aided Ensemble Empirical-Mode Decomposition for EEG Analysis During Anesthesia

Dan Chen, Duan Li, Muzhou Xiong, Hong Bao, Xiaoli Li

Tags: Biology, Medicine, Signal processing

April 5, 2011 by hgpu

GpuWars: Design and Implementation of a GPGPU Game

Mark Joselli, Esteban Clua

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Tags: Artificial intelligence, Computer science, CUDA, Game physics, Games, nVidia, nVidia GeForce 8200 M, nVidia GeForce 8800 GS

April 5, 2011 by hgpu

Development of nonlinear filter bank system for real-time beautification of facial video using GPGPU

A. Yoda, Y. Iguchi, K. Arakawa

Tags: Filtering, Image processing

April 5, 2011 by hgpu

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Accelerating a Linear Programming Algorithm on AMD GPUs

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Towards Efficient and Practical GPU Multitasking in the Era of LLM

Bandicoot: C++ library for GPU accelerated linear algebra

Bandicoot: A Templated C++ Library for GPU Linear Algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

The Fused Kernel Library: A C++ API to Develop Highly-Efficient GPU Libraries

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

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high performance computing on graphics processing units: hgpu.org

Applications

High Performance Hybrid Functional Petri Net Simulations of Biological Pathway Models on CUDA

A Hybrid Computational Grid Architecture for Comparative Genomics

Barnes-hut treecode on GPU

Parallel and distributed seismic wave field modeling with combined Linux clusters and graphics processing units

Implementation of Ant Colony Algorithm Based on GPU

High-speed electromagnetic field simulation by HIE-FDTD method with GPGPU

FSimGP^2: An Efficient Fault Simulator with GPGPU

An implementation and its evaluation of password cracking tool parallelized on GPGPU

Enabling Energy-Efficient Analysis of Massive Neural Signals Using GPGPU

GPGPU-Aided Ensemble Empirical-Mode Decomposition for EEG Analysis During Anesthesia

GpuWars: Design and Implementation of a GPGPU Game

Development of nonlinear filter bank system for real-time beautification of facial video using GPGPU

Recent source codes

CrossTL: Universal Programming Language & Translator

TBD-GPU

DG-SWEM - The Discontinuous Galerkin Shallow Water Equation Model

torchPDLP: Primal-Dual Linear Programming in PyTorch. In collaboration with AMD and IPAM

Benchmarks for Dissecting CPU-GPU Unified Physical Memory on AMD MI300A APUs

kvcached: Elastic KV cache for dynamic GPU sharing and efficient multi-LLM inference

Bandicoot: C++ library for GPU accelerated linear algebra

Luthier: Bridging Auto-Tuning and Vendor Libraries for Efficient Deep Learning Inference

Fused Kernel Library (FKL)

GPUHammer: Rowhammer Attacks on GPU Memories are Practical

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