Applications

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Parallelization of KMP String Matching Algorithm on Different SIMD architectures: Multi-Core and GPGPU’s

Akhtar Rasool, Nilay Khare

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Tags: Algorithms, ATI, Computer science, OpenCL, Pattern recognition, String matching

August 4, 2012 by hgpu

Parallelization Design of Irregular Algorithms of Video Processing on GPUs

Huayou Su, Jun Chai, Mei Wen, Ju Ren, Chunyuan Zhang

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Tags: CUDA, Image processing, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 460, Tesla C2050, Video encoding

August 4, 2012 by hgpu

Porting marine ecosystem model spin-up using transport matrices to GPUs

E. Siewertsen, J. Piwonski, T. Slawig

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Tags: CUDA, Earth and Space Sciences, Fortran, MPI, nVidia, nVidia GeForce GTX 480

August 4, 2012 by hgpu

Solving very large instances of the scheduling of independent tasks problem on the GPU

Frederic Pinel, Bernabe Dorronsoro, Pascal Bouvry

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Tags: Computer science, CUDA, nVidia, Task scheduling, Tesla C2050

August 3, 2012 by hgpu

Power Management for GPU-CPU Heterogeneous Systems

Xue Li

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce 8800 GTX, Thesis

August 3, 2012 by hgpu

GPU-to-GPU and Host-to-Host multipattern string matching on a GPU

Xinyan Zha, Sartaj Sahni

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Tags: Algorithms, Computer science, CUDA, nVidia, String matching, Tesla

August 3, 2012 by hgpu

Parallel Statistical Analysis of Analog Circuits by GPU-accelerated Graph-based Approach

Xue-Xin Liu, Sheldon X.-D. Tan, Hai Wang

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Tags: Computer science, CUDA, Data parallelism, Electronic design automation, nVidia, Tesla C2070

August 3, 2012 by hgpu

Performance Analysis of GPU Accelerators with Realizable Utilization of Computational Density

Justin Richardson, Alan D. George, Herman Lam

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Tags: Computer science, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GT 240, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Performance, Tesla C1060, Tesla C870

August 3, 2012 by hgpu

Parallelizing flow-accumulation calculations on graphics processing units – From iterative DEM preprocessing algorithm to recursive multiple-flow-direction algorithm

Cheng-Zhi Qin, Lijun Zhan

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Tags: CUDA, Earth and Space Sciences, Geoscience, Graph theory, nVidia, nVidia GeForce GT 330

August 2, 2012 by hgpu

Automated Tool to Generate Parallel CUDA code from a Serial C Code

Akhil Jindal, Nikhil Jindal, Divyashikha Sethia

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Tags: Code generation, Computer science, CUDA, nVidia, nVidia GeForce 8400 GS

August 2, 2012 by hgpu

C to Cellular Automata and Execution on CPU, GPU and FPGA

Jens Drieseberg, Christian Siemers

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Tags: Cellular automata, Computer science, CUDA, FPGA, nVidia, nVidia GeForce GTX 580, OpenMP

August 2, 2012 by hgpu

Accelerating Pathology Image Data Cross-Comparison on CPU-GPU Hybrid Systems

Kaibo Wang, Yin Huai, Rubao Lee, Fusheng Wang, Xiaodong Zhang, Joel H. Saltz

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Tags: CUDA, Databases, Image processing, nVidia, nVidia GeForce GTX 580, Tesla M2050

August 2, 2012 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Applications

Parallelization of KMP String Matching Algorithm on Different SIMD architectures: Multi-Core and GPGPU’s

Parallelization Design of Irregular Algorithms of Video Processing on GPUs

Porting marine ecosystem model spin-up using transport matrices to GPUs

Solving very large instances of the scheduling of independent tasks problem on the GPU

Power Management for GPU-CPU Heterogeneous Systems

GPU-to-GPU and Host-to-Host multipattern string matching on a GPU

Parallel Statistical Analysis of Analog Circuits by GPU-accelerated Graph-based Approach

Performance Analysis of GPU Accelerators with Realizable Utilization of Computational Density

Parallelizing flow-accumulation calculations on graphics processing units – From iterative DEM preprocessing algorithm to recursive multiple-flow-direction algorithm

Automated Tool to Generate Parallel CUDA code from a Serial C Code

C to Cellular Automata and Execution on CPU, GPU and FPGA

Accelerating Pathology Image Data Cross-Comparison on CPU-GPU Hybrid Systems

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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