high performance computing on graphics processing units: hgpu.org

Clemens Grelck, Kevin Hammond, Heinz Hertlein, Philip Holzenspies, Chris Jesshope, Raimund Kirner, Bernd Scheuermann, Alex Shafarenko, Iraneus Te Boekhorst, Volkmar Wieser

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GT 425 M, Performance, Visualization

December 29, 2011 by hgpu

Parallel computing system for the efficient calculation of molecular similarity based on negative electrostatic potential

Raul Ernesto Torres Carvajal

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Tags: Algorithms, Chemistry, Cluster analysis, CUDA, Electrostatic potential, Electrostatics, nVidia, nVidia GeForce GT 240, Pattern recognition, Thesis

December 29, 2011 by hgpu

Parallel Quadtree Coding of Large-Scale Raster Geospatial Data on Multicore CPUs and GPGPUs

Jianting Zhang, Simin You, Le Gruenwald

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Tags: CUDA, Data parallelism, Earth and Space Sciences, Geoscience, nVidia, Optimization, Sensing, Tesla C2050

December 29, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

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high performance computing on graphics processing units: hgpu.org

Applications

Construction and Rendering of Trimmed Blending Surfaces with Sharp Features on a GPU

Faster Dark Matter Calculations Using the GPU

Building Human Brain Network in 3D Coefficient Map Determined by X-ray Microtomography

Deep Shadow Maps from Volumetric Data on the GPU

Resource-Aware Compiler Prefetching for Fine-Grained Many-Cores

Acceleration of PIC Simulation with GPU

Scalable Fast Multipole Methods on Distributed Heterogeneous Architectures

Parallelism, Patterns, and Performance in Iterative MRI Reconstruction

Visualization assisted by parallel processing

Engineering Concurrent Software Guided by Statistical Performance Analysis

Parallel computing system for the efficient calculation of molecular similarity based on negative electrostatic potential

Parallel Quadtree Coding of Large-Scale Raster Geospatial Data on Multicore CPUs and GPGPUs

Recent source codes

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

Gaia AVU-GSR

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

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