Programming

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Design and Performance Analysis of Parallel Processing of SRTP Packets

Jan Wozniak

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Tags: Computer science, Intel, OpenCL, Security

April 26, 2013 by hgpu

Accelerating Population Balance Model-based particulate process simulations via parallel computing

Anuj Varghese Prakash

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Tags: Biochemistry, Chemistry, Computer science, CUDA, Distributed computing, nVidia, nVidia GeForce GTX 280, Thesis

April 26, 2013 by hgpu

Numerical Modeling of Atmospheric Vortices

Sudeep Dasari, David Murphy, Colin Redman

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Tags: CUDA, Differential equations, Earth and Space Sciences, nVidia, ODEs, Ordinary differential equations

April 25, 2013 by hgpu

Modeling the spatio-temporal evolution of fracture networks and fluid-rock interactions in GPU: Applications to lithospheric geodynamics

Boris Galvan

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Tags: CUDA, Diffusion equation, Earth and Space Sciences, Finite difference, Geoscience, nVidia, nVidia GeForce GTX 590, Thesis

April 25, 2013 by hgpu

High Performance Computing with GPUs

Nikita Vakulin, Riley Shaw, Timothy Livingston

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Tags: Computer science, CUDA, Differential equations, Finite element method, nVidia, Package

April 25, 2013 by hgpu

Directive-based Approach to Heterogeneous Computing

Ruyman Reyes Castro

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 480, OpenACC, OpenCL, Package, Python, Tesla C1060, Thesis

April 25, 2013 by hgpu

Faster Upper Body Pose Estimation and Recognition Using CUDA

Dane L. Brown, Mehrdad Ghaziasgar, James Connan

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Tags: Algorithms, Computer vision, CUDA, Image processing, nVidia, nVidia GeForce GTX 580

April 25, 2013 by hgpu

Reduce, Reuse, Recycle (R^3): a Design Methodology for Sparse Matrix Vector Multiplication on Reconfigurable Platforms

Kevin Townsend, Joseph Zambreno

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Tags: Computer science, CUDA, nVidia, Sparse matrix, Tesla M2090, Tesla S1070

April 23, 2013 by hgpu

Parallel Computing for Accelerated Texture Classification with Local Binary Pattern Descriptors using OpenCL

CYN Dwith, Rathna.G.N

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Tags: Algorithms, ATI, Computer science, Heterogeneous systems, OpenCL, Pattern recognition

April 23, 2013 by hgpu

Solving Wave Equations on Unstructured Geometries

Andreas Klockner, Timothy Warburton, Jan S. Hesthaven

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Tags: Computer science, Mathematical Software, Numerical Analysis, nVidia, nVidia GeForce GTX 295, OpenCL, Package, Python, Wave equation

April 23, 2013 by hgpu

GPU Scripting and Code Generation with PyCUDA

Andreas Klockner, Nicolas Pinto, Bryan Catanzaro, Yunsup Lee, Paul Ivanov, Ahmed Fasih

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Tags: Code generation, Computer science, CUDA, nVidia, OpenCL, Package, PyOpenCL, Python

April 23, 2013 by hgpu

SW# – GPU enabled exact alignments on genome scale

Matija Korpar, Mile Sikic

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Tags: Bioinformatics, Biology, Computer science, CUDA, nVidia, nVidia GeForce GTX 560, nVidia GeForce GTX 570, nVidia GeForce GTX 690, Package, Sequence alignment, Smith-Waterman algorithm

April 23, 2013 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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high performance computing on graphics processing units: hgpu.org

Programming

Design and Performance Analysis of Parallel Processing of SRTP Packets

Accelerating Population Balance Model-based particulate process simulations via parallel computing

Numerical Modeling of Atmospheric Vortices

Modeling the spatio-temporal evolution of fracture networks and fluid-rock interactions in GPU: Applications to lithospheric geodynamics

High Performance Computing with GPUs

Directive-based Approach to Heterogeneous Computing

Faster Upper Body Pose Estimation and Recognition Using CUDA

Reduce, Reuse, Recycle (R^3): a Design Methodology for Sparse Matrix Vector Multiplication on Reconfigurable Platforms

Parallel Computing for Accelerated Texture Classification with Local Binary Pattern Descriptors using OpenCL

Solving Wave Equations on Unstructured Geometries

GPU Scripting and Code Generation with PyCUDA

SW# – GPU enabled exact alignments on genome scale

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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