high performance computing on graphics processing units: hgpu.org

Jaejin Lee, Jungwon Kim, Sangmin Seo, Seungkyun Kim, Jungho Park, Honggyu Kim, Thanh T. Dao, Yongjin Cho, Sung J. Seo, Seung H. Lee, Seung M. Cho, Hyo J. Song, Sang B. Suh, Jong D. Choi

Tags: Computer science, Memory model, OpenCL

January 16, 2011 by hgpu

Using generalized ensemble simulations and Markov state models to identify conformational states

Gregory R. Bowman, Xuhui Huang, Vijay S. Pande

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Tags: CUDA, Molecular dynamics, Molecular modeling, nVidia, Package, Physics, Thermodynamics

January 16, 2011 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

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high performance computing on graphics processing units: hgpu.org

Programming

Highly accelerated simulations of glassy dynamics using GPUs: caveats on limited floating-point precision

Automatic bi-layer video segmentation based on sensor fusion

Accurate multi-view reconstruction using robust binocular stereo and surface meshing

Solving dense linear systems on platforms with multiple hardware accelerators

CheCUDA: A Checkpoint/Restart Tool for CUDA Applications

Evaluating GPUs for network packet signature matching

Acceleration of Acoustic Emission Signal Processing Algorithms using CUDA Standard

Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture

Parallelization Strategies for Ant Colony Optimisation on GPUs

Interactive visual analysis of contrast-enhanced ultrasound data based on local neighborhood statistics

An OpenCL framework for heterogeneous multicores with local memory

Using generalized ensemble simulations and Markov state models to identify conformational states

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters