high performance computing on graphics processing units: hgpu.org

Programming

hgpu.org » Programming

GPU-ABiSort: Optimal Parallel Sorting on Stream Architectures

A. Gres, G. Zachmann

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Tags: Algorithms, Computer science, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce 7800 GTX, Sorting

December 13, 2010 by hgpu

Toward Acceleration of RSA Using 3D Graphics Hardware

A. Moss, N. P. Smart

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Tags: Algorithms, Computer science, GLSL, nVidia, nVidia GeForce 7800 GTX, OpenGL, Security

December 13, 2010 by hgpu

Remotely Keyed Cryptographics Secure Remote Display Access Using (Mostly) Untrusted Hardware

Debra L. Cook, Ricardo Baratto, Angelos D. Keromytis

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Tags: Algorithms, ATI, ATI Mobility Radeon 7500, Computer science, nVidia, nVidia GeForce 3, OpenGL, Security

December 13, 2010 by hgpu

A Framework for Megascale Agent Based Model Simulations on Graphics Processing Units

Mikola Lysenko, Roshan M. D'Souz

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Tags: Algorithms, Computer science, GLSL, nVidia, nVidia GeForce 8800 GTX, OpenGL, Programming techniques

December 13, 2010 by hgpu

A Framework for Megascale Agent Based Model Simulations on the GPU

Mikola Lysenko, Roshan D'Souza, Keyvan Rahmani

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Tags: Algorithms, Computer science, GLSL, nVidia, nVidia GeForce 8800 GTX, OpenGL, Programming techniques

December 13, 2010 by hgpu

Accelerating Compute-Intensive Applications with GPUs and FPGAs

Shuai Che, Jie Li, Jeremy W. Sheaffer, Kevin Skadron, John Lach

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Tags: Architecture, Computer science, CUDA, FPGA, nVidia, nVidia GeForce 8800 GTX, Package, Performance

December 13, 2010 by hgpu

Real-world comparison of CPU and GPU implementations of SNPrank: a network analysis tool for GWAS

Nicholas A. Davis, Ahwan Pandey, B. A. McKinney

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Tags: Bioinformatics, Biology, CUDA, Genetics, Medicine, nVidia, Package, Tesla M1060

December 13, 2010 by hgpu

New Row-grouped CSR format for storing the sparse matrices on GPU with implementation in CUDA

Tomas Oberhuber, Atsushi Suzuki, Jan Vacata

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Tags: Computer science, CUDA, Linear Algebra, nVidia, nVidia GeForce GTX 280, Sparse matrix

December 13, 2010 by hgpu

Toward a multicore architecture for real-time ray-tracing

V. Govindaraju, P. Djeu, K. Sankaralingam, M. Vernon, W. R. Mark

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Tags: Algorithms, Architecture, Computer science, Rendering

December 13, 2010 by hgpu

Anisotropic noise

Alexander Goldberg, Matthias Zwicker, Fredo Durand

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Tags: 3D Graphics and Realism, Algorithms, Computer science, nVidia, nVidia GeForce 6800 Ultra, Rendering, Shaders

December 13, 2010 by hgpu

Real-time gradient-domain painting

James McCann, Nancy S. Pollard

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Tags: Algorithms, Image processing, nVidia, nVidia GeForce 6800 GT, nVidia GeForce 8600 GTS

December 13, 2010 by hgpu

SWPS3 – fast multi-threaded vectorized Smith-Waterman for IBM Cell/B.E. and x86/SSE2

Adam Szalkowski, Christian Ledergerber, Philipp Kraehenbuehl, Christophe Dessimoz

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Tags: Biology, Cell processor, CUDA, nVidia, nVidia GeForce 8800 GTX, Optimization, Package, Sequence alignment, Smith-Waterman algorithm

December 12, 2010 by hgpu

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Private LLM Inference on Consumer Blackwell GPUs: A Practical Guide for Cost-Effective Local Deployment in SMEs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Generating Literature-Driven Scientific Theories at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Nsight Python: A Python-First Profiling Toolkit for Seamless GPU Kernel Analysis (Tool)

Awesome LLM-Driven Kernel Generation

Towards Automated Kernel Generation in the Era of LLMs

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Tilus: A Tile-Level GPGPU Programming Language for Low-Precision Computation

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

See all packages

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high performance computing on graphics processing units: hgpu.org

Programming

GPU-ABiSort: Optimal Parallel Sorting on Stream Architectures

Toward Acceleration of RSA Using 3D Graphics Hardware

Remotely Keyed Cryptographics Secure Remote Display Access Using (Mostly) Untrusted Hardware

A Framework for Megascale Agent Based Model Simulations on Graphics Processing Units

A Framework for Megascale Agent Based Model Simulations on the GPU

Accelerating Compute-Intensive Applications with GPUs and FPGAs

Real-world comparison of CPU and GPU implementations of SNPrank: a network analysis tool for GWAS

New Row-grouped CSR format for storing the sparse matrices on GPU with implementation in CUDA

Toward a multicore architecture for real-time ray-tracing

Anisotropic noise

Real-time gradient-domain painting

SWPS3 – fast multi-threaded vectorized Smith-Waterman for IBM Cell/B.E. and x86/SSE2

Recent source codes

bioagent-bench: Benchmark for evaluating LLM agents in bioinformatics

Benchmark suite for LLM inference on NVIDIA consumer GPUs

Theorizer: from the paper Generating Literature-Driven Scientific Discoveries at Scale

Nsight Python: a Python kernel profiling interface based on NVIDIA Nsight Tools

Awesome LLM-Driven Kernel Generation

PhysProver: Advancing Automatic Theorem Proving for Physics

ParaCodex: A Profiling-Guided Autonomous Coding Agent for Reliable Parallel Code Generation and Translation

SeedFold: Scaling Biomolecular Structure Prediction

Tilus: A Tile-Level GPU Kernel Programming Language

Memory-Efficient Acceleration of Block Low-Rank Foundation Models on Resource Constrained GPUs

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