high performance computing on graphics processing units: hgpu.org

Programming

Rapid RNA Folding: Analysis and Acceleration of the Zuker Recurrence

Arpith C. Jacob, Jeremy D. Buhler, Roger D. Chamberlain

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Tags: Algorithms, Bioinformatics, Biology, Computational biology, CUDA, FPGA, nVidia, nVidia GeForce GTX 280, RNA, Tesla C870

August 27, 2011 by hgpu

A New Approach for Color Character Extraction Based on Parallel Clustering

Miao Qing, Fu Zhong-liang, Zhao Xiang-hui

Tags: Algorithms, Clustering, CUDA, Image processing, nVidia

August 27, 2011 by hgpu

A new adaptive model for real-time fluid simulation with complex boundaries

Jian He, Xi Chen, Zhangye Wang, Ke Yan, Chen Cao, Qunsheng Peng

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Tags: Algorithms, Cg, CUDA, Fluid dynamics, Fluid simulation, nVidia, nVidia GeForce GTX 280, Voxelization

August 27, 2011 by hgpu

Exploring graphics processing units as parallel coprocessors for online aggregation

Tobias Lauer, Amitava Datta, Zurab Khadikov, Christoffer Anselm

Tags: Algorithms, Computer science, CUDA, Databases, nVidia, Performance

August 26, 2011 by hgpu

Parallel Viewshed Analysis on GPU Using CUDA

Yingjie Xia, Yang Li, Xingmin Shi

Tags: CUDA, Image processing, nVidia

August 26, 2011 by hgpu

Acceleration of an improved Retinex algorithm

Yuan-Kai Wang, Wen-Bin Huang

Tags: Algorithms, Compression, CUDA, Image processing, nVidia

August 26, 2011 by hgpu

Considering GPGPU for HPC Centers: Is It Worth the Effort?

Hans Hacker, Carsten Trinitis, Josef Weidendorfer, Matthias Brehm

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Tags: Computer science, CUDA, nVidia, Performance, Review, Tesla C1060

August 25, 2011 by hgpu

A PC-based fully-programmable medical ultrasound imaging system using a graphics processing unit

Seokhyun Kim, Hak-yeol Sohn, Jin Ho Chang, Tai-kyoung Song, Yangmo Yoo

Tags: Algorithms, CUDA, Image processing, Medicine, nVidia, nVidia GeForce GTX 285, Ultrasound

August 25, 2011 by hgpu

Fine-grain Parallelism using Multi-core, Cell/BE, and GPU Systems

Frederico Pratas, Pedro Trancoso, Leonel Sousa, Alexandros Stamatakis, Guochun Shi, Volodymyr Kindratenko

Tags: Bioinformatics, Biology, Cell processor, CUDA, Molecular dynamics, nVidia

August 25, 2011 by hgpu

An efficient GPU-based time domain solver for the acoustic wave equation

Ravish Mehra, Nikunj Raghuvanshi, Lauri Savioja, Ming C. Lin, Dinesh Manocha

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Tags: Acoustics, Algorithms, CUDA, FDTD, Finite-difference time-domain, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce 9600 M GT, nVidia GeForce GTX 480, nVidia Quadro FX 5800, Physics, Visualization, Wave equation

August 25, 2011 by hgpu

GPU-acceleration for Moving Particle Semi-implicit Method

Chiemi Hori, Hitoshi Gotoh, Hiroyuki Ikari, Abbas Khayyer

Tags: CUDA, Fluid dynamics, nVidia, Poisson equation

August 25, 2011 by hgpu

A mapping path for multi-GPGPU accelerated computers from a portable high level programming abstraction

Allen Leung, Nicolas Vasilache, Benoit Meister, Muthu Baskaran, David Wohlford, Cedric Bastoul, Richard Lethin

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Tags: Algorithms, Code generation, Compilers, Computer science, CUBLAS, CUDA, nVidia, nVidia GeForce 9800 GX2, nVidia GeForce GTX 285, Programming Languages

August 24, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

Rapid RNA Folding: Analysis and Acceleration of the Zuker Recurrence

A New Approach for Color Character Extraction Based on Parallel Clustering

A new adaptive model for real-time fluid simulation with complex boundaries

Exploring graphics processing units as parallel coprocessors for online aggregation

Parallel Viewshed Analysis on GPU Using CUDA

Acceleration of an improved Retinex algorithm

Considering GPGPU for HPC Centers: Is It Worth the Effort?

A PC-based fully-programmable medical ultrasound imaging system using a graphics processing unit

Fine-grain Parallelism using Multi-core, Cell/BE, and GPU Systems

An efficient GPU-based time domain solver for the acoustic wave equation

GPU-acceleration for Moving Particle Semi-implicit Method

A mapping path for multi-GPGPU accelerated computers from a portable high level programming abstraction

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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