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Parallelizing the Cellular Potts Model on graphics processing units

Jose J. Tapia, Roshan M. D'Souza

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Tags: Biology, Computational biology, CUDA, nVidia, Tesla C1060

July 22, 2011 by hgpu

A refactoring tool to extract GPU kernels

Kostadin Damevski, Madhan Muralimanohar

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Tags: Code generation, Compilers, Computer science, CUDA, nVidia, Presentation

July 22, 2011 by hgpu

Low-overhead diskless checkpoint for hybrid computing systems

Leonardo Bautista Gomez, Akira Nukada, Naoya Maruyama, Franck Cappello, Satoshi Matsuoka

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, Programming techniques

July 20, 2011 by hgpu

Evolutionary Quantum Logic Synthesis of Boolean Reversible Logic Circuits Embedded in Ternary Quantum Space using Heuristics

Maartin Lukac, Marek Perkowski, Michitaka Kameyama

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Tags: Artificial intelligence, CUDA, Genetic programming, nVidia, Physics, Quantum Physics

July 19, 2011 by hgpu

GPU-based fast Monte Carlo simulation for radiotherapy dose calculation

Xun Jia, Xuejun Gu, Yan Jiang Graves, Michael Folkerts, Steve B. Jiang

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Tags: CUDA, Medical Physics, Monte Carlo simulation, nVidia, Physics, Radiotherapy, Tesla C2050

July 19, 2011 by hgpu

Massively parallelized replica-exchange simulations of polymers on GPUs

Jonathan Gross, Wolfhard Janke, Michael Bachmann

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Tags: Biomolecules, Computational Physics, Condensed matter, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Physics, Polymer Systems, Tesla C1060

July 19, 2011 by hgpu

EQUIPE: Parallel equivalence checking with GP-GPUs

Debapriya Chatterjee, Valeria Bertacco

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Tags: Computer science, CUDA, Electronic design automation, nVidia, nVidia GeForce 8800 GT, SAT

July 19, 2011 by hgpu

System integration of FastSPECT III, a dedicated SPECT rodent-brain imager based on BazookaSPECT detector technology

Brian W. Miller, Lars R. Furenlid, Stephen K. Moore, H. Bradford Barber, Vivek V. Nagarkar, Harrison H. Barrett

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Tags: Computed tomography, CT, CUDA, GPU cluster, Image reconstruction, Medicine, nVidia, nVidia GeForce GTX 295, OpenMP, Tomography

July 19, 2011 by hgpu

Discrete fourier transform on multicore

Franz Franchetti, Markus Puschel, Yevgen Voronenko, Srinivas Chellappa, Jose M. F. Moura

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Tags: Cell processor, CUDA, FFT, nVidia, nVidia GeForce GTX 280, Signal processing

July 19, 2011 by hgpu

Towards fully user transparent task and data parallel image processing

Jan Lemeire, Yan Zhao, Peter Schelkens, Steve De Backer, Frans Cornelissen, Bert Torfs

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Tags: Algorithms, CUDA, Image processing, nVidia

July 19, 2011 by hgpu

Tracking humans interacting with the environment using efficient hierarchical sampling and layered observation models

Jan Bandouch, Michael Beetz

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Tags: Computer science, Computer vision, CUDA, nVidia, Video tracking

July 19, 2011 by hgpu

An auto-tuning framework for parallel multicore stencil computations

Shoaib Kamil, Cy Chan, Leonid Oliker, John Shalf, Samuel Williams

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Tags: Code generation, Computer science, CUDA, Fortran, nVidia, nVidia GeForce GTX 280

July 18, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Programming

Parallelizing the Cellular Potts Model on graphics processing units

A refactoring tool to extract GPU kernels

Low-overhead diskless checkpoint for hybrid computing systems

Evolutionary Quantum Logic Synthesis of Boolean Reversible Logic Circuits Embedded in Ternary Quantum Space using Heuristics

GPU-based fast Monte Carlo simulation for radiotherapy dose calculation

Massively parallelized replica-exchange simulations of polymers on GPUs

EQUIPE: Parallel equivalence checking with GP-GPUs

System integration of FastSPECT III, a dedicated SPECT rodent-brain imager based on BazookaSPECT detector technology

Discrete fourier transform on multicore

Towards fully user transparent task and data parallel image processing

Tracking humans interacting with the environment using efficient hierarchical sampling and layered observation models

An auto-tuning framework for parallel multicore stencil computations

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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