high performance computing on graphics processing units: hgpu.org

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Using Graphic Processing Unit in Block Cipher Calculations (thesis)

Urmas Rosenberg

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Tags: AES, Block Ciphers, Cg, Computer science, CUDA, nVidia, nVidia GeForce 6800 GT, nVidia GeForce 8800 GTS, OpenGL, Package, Security, Thesis

July 5, 2011 by hgpu

Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup

Andrew T. Magis, John C. Earls, Youn-Hee H. Ko, James A. Eddy, Nathan D. Price

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, Package

July 1, 2011 by hgpu

CAMPAIGN: An open-source Library of GPU-accelerated Data Clustering Algorithms

Kai J. Kohlhoff, Marc H. Sosnick, William T. Hsu, Vijay S. Pande, Russ B. Altman

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Tags: Bioinformatics, Biology, Clustering, CUDA, nVidia, Package

July 1, 2011 by hgpu

EASEA: specification and execution of evolutionary algorithms on GPGPU

Ogier Maitre, Frederic Kruger, Stephane Querry, Nicolas Lachiche, Pierre Collet

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Tags: Computer science, CUDA, Evolutionary Computations, Genetic programming, nVidia, nVidia GeForce GTX 480, Package

July 1, 2011 by hgpu

Voreen: A Rapid-Prototyping Environment for Ray-Casting-Based Volume Visualizations

Jennis Meyer-Spradow, Timo Ropinski, Jorg Mensmann, Klaus Hinrichs

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Tags: Computer science, GLSL, OpenGL, Package, Rendering, Visualization

June 27, 2011 by hgpu

Practical parallel imaging compressed sensing MRI: Summary of two years of experience in accelerating body MRI of pediatric patients

S.S. Vasanawala, M.J. Murphy, M.T. Alley, P. Lai, K. Keutzer, J.M. Pauly, M. Lustig

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Tags: CUDA, Image reconstruction, Medicine, MRI, nVidia, Package

June 21, 2011 by hgpu

GPU accelerated rotation-based emission tomography reconstruction

S. Pedemonte, A. Bousse, K. Erlandsson, M. Modat, S. Arridge, B. F. Hutton, S. Ourselin

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Tags: CUDA, Image reconstruction, Medicine, nVidia, Package, Tomography

June 21, 2011 by hgpu

Protein alignment algorithms with an efficient backtracking routine on multiple GPUs

Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzynka, Erwin Pesch, Pawel Wojciechowski

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 480, Package, Sequence alignment, Tesla S1070

June 21, 2011 by hgpu

ClearView: An Interactive Context Preserving Hotspot Visualization Technique

Jens Kruger, Jens Schneider, Rudiger Westermann

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Tags: 3D Graphics and Realism, ATI, ATI Radeon X1800, Computer science, DirectX, Package, Visualization

June 18, 2011 by hgpu

Coming Soon: Research in a Cloud

Pam Frost Gorder

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Tags: Chemistry, Cloud, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 280, Package

June 18, 2011 by hgpu

Brownian dynamics simulations on CPU and GPU with BD_BOX

Maciej Dlugosz, Pawel Zielinski, Joanna Trylska

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Tags: Chemistry, CUDA, Molecular dynamics, MPI, nVidia, OpenMP, Package

June 16, 2011 by hgpu

A sparse octree gravitational N-body code that runs entirely on the GPU processor

Jeroen Bedorf, Evghenii Gaburov, Simon Portegies Zwart

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Tags: Astrophysics, CUDA, Gravitation, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, nVidia GeForce 8800 GTS, nVidia GeForce GTX 285, nVidia GeForce GTX 480, Package, Tesla C1060, Tesla C2050

June 14, 2011 by hgpu

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

DeepCompile: A Compiler-Driven Approach to Optimizing Distributed Deep Learning Training

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

GigaAPI for GPU Parallelization

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

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high performance computing on graphics processing units: hgpu.org

Using Graphic Processing Unit in Block Cipher Calculations (thesis)

Graphics processing unit implementations of relative expression analysis algorithms enable dramatic computational speedup

CAMPAIGN: An open-source Library of GPU-accelerated Data Clustering Algorithms

EASEA: specification and execution of evolutionary algorithms on GPGPU

Voreen: A Rapid-Prototyping Environment for Ray-Casting-Based Volume Visualizations

Practical parallel imaging compressed sensing MRI: Summary of two years of experience in accelerating body MRI of pediatric patients

GPU accelerated rotation-based emission tomography reconstruction

Protein alignment algorithms with an efficient backtracking routine on multiple GPUs

ClearView: An Interactive Context Preserving Hotspot Visualization Technique

Brownian dynamics simulations on CPU and GPU with BD_BOX

A sparse octree gravitational N-body code that runs entirely on the GPU processor

Recent source codes

PELSI: Power-Efficient Layer-Switched Inference

Ouroboros: Virtualized Queues for dynamic memory management

MSCCL++: A GPU-driven communication stack for scalable AI applications

Benchmark compute shader of Unity against InteropUnityCUDA

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

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