high performance computing on graphics processing units: hgpu.org

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Efficient Finite Element Geometric Multigrid Solvers for Unstructured Grids on GPUs

Markus Geveler, Dirk Ribbrock, Dominik Goddeke, Peter Zajac, Stefan Turek

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Tags: Cell processor, CUDA, Finite element method, Fluid dynamics, GPU cluster, MPI, nVidia, nVidia GeForce GTX 285, Package

March 1, 2011 by hgpu

Performance and accuracy of Lattice-Boltzmann kernels on multi- and manycore architectures

Dirk Ribbrock, Markus Geveler, Dominik Goddeke, Stefan Turek

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Tags: Cell processor, CUDA, Fluid dynamics, GPU cluster, Lattice Boltzmann model, MPI, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 285, Package

March 1, 2011 by hgpu

Lattice-Boltzmann Simulation of the Shallow-Water Equations with Fluid-Structure Interaction on Multi- and Manycore Processors

Markus Geveler, Dirk Ribbrock, Dominik Goddeke, and Stefan Turek

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Tags: Cell processor, CUDA, Fluid dynamics, GPU cluster, Lattice Boltzmann model, MPI, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 285, Package

March 1, 2011 by hgpu

A Simulation Suite for Lattice-Boltzmann based Real-Time CFD Applications Exploiting Multi-Level Parallelism on modern Multi- and Many-Core Architectures

Markus Geveler, Dirk Ribbrock, Sven Mallach, Dominik Goddeke

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Tags: Cell processor, CUDA, Fluid dynamics, GPU cluster, Lattice Boltzmann model, MPI, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 285, Package

March 1, 2011 by hgpu

STOCHSIMGPU: Parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB

Guido Klingbeil, Radek Erban, Mike Giles, Philip K. Maini

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Tags: Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce 8800, Package, Stochastic simulation

February 28, 2011 by hgpu

Size Matters: Space/Time Tradeoffs to Improve GPGPU Applications Performance

Abdullah Gharaibeh, Matei Ripeanu

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Tags: Bioinformatics, Biology, Computational biology, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Sequence alignment, Short read mapping, Suffix trees

February 27, 2011 by hgpu

Accelerating CUDA Graph Algorithms at Maximum Warp

Sungpack Hong, Sang Kyun Kim, Tayo Oguntebi, Kunle Olukotun

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 260, nVidia GeForce GTX 275, Package, Performance, Programming techniques

February 27, 2011 by hgpu

StarPU: a Runtime System for Scheduling Tasks over Accelerator-Based Multicore Machines

Cedric Augonnet, Samuel Thibault, Raymond Namyst

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Tags: Computer science, CUDA, Distributed computing, nVidia, nVidia Quadro FX 4600, nVidia Quadro FX 5800, Package, Performance

February 26, 2011 by hgpu

Real-time blood flow visualization using the graphics processing unit

Owen Yang, David Cuccia, Bernard Choi

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Tags: CUDA, Image processing, Medicine, nVidia, nVidia GeForce 8800 GTS, Optics, Package

February 26, 2011 by hgpu

SU(2) Lattice Gauge Theory Simulations on Fermi GPUs

Nuno Cardoso, Pedro Bicudo

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, Monte Carlo simulation, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 480, Package, Physics

February 25, 2011 by hgpu

Barra, a Modular Functional GPU Simulator for GPGPU

Sylvain Collange, David Defour, David Parello

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 9800 GX2, Package, Performance

February 24, 2011 by hgpu

Fast Exact String Matching on the GPU

Michael C. Schatz, Cole Trapnell

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Tags: Algorithms, Computational biology, Computer science, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Search, String matching, Suffix trees

February 20, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Efficient Finite Element Geometric Multigrid Solvers for Unstructured Grids on GPUs

Performance and accuracy of Lattice-Boltzmann kernels on multi- and manycore architectures

Lattice-Boltzmann Simulation of the Shallow-Water Equations with Fluid-Structure Interaction on Multi- and Manycore Processors

A Simulation Suite for Lattice-Boltzmann based Real-Time CFD Applications Exploiting Multi-Level Parallelism on modern Multi- and Many-Core Architectures

STOCHSIMGPU: Parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB

Size Matters: Space/Time Tradeoffs to Improve GPGPU Applications Performance

Accelerating CUDA Graph Algorithms at Maximum Warp

StarPU: a Runtime System for Scheduling Tasks over Accelerator-Based Multicore Machines

Real-time blood flow visualization using the graphics processing unit

SU(2) Lattice Gauge Theory Simulations on Fermi GPUs

Barra, a Modular Functional GPU Simulator for GPGPU

Fast Exact String Matching on the GPU

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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