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Bayesian neural networks for detecting epistasis in genetic association studies

Andrew L Beam, Alison Motsinger-Reif, Jon Doyle

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Tags: Bayesian, Biology, CUDA, CULA, Neural networks, nVidia, Package, Python

December 15, 2014 by hgpu

Analysis and Optimization Techniques for Massively Parallel Processors

Wenhao Jia

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Tags: Algorithms, ATI, ATI Radeon HD 7970, Computer science, CUDA, Heterogeneous systems, nVidia, OpenCL, PTX, Tesla C2070, Thesis, Virtualization

December 15, 2014 by hgpu

Performance Comparison of GPUs with a Genetic Algorithm based on CUDA

Jae-Hyun Seo, Eun-Sol Ko, Yong-Hyuk Kim

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Tags: Algorithms, Computer science, CUDA, Genetic algorithm, nVidia, nVidia GeForce GT 430, nVidia GeForce GTX 260, nVidia GeForce GTX 760, nVidia GeForce GTX 770

December 15, 2014 by hgpu

Bamboo: Automatic Translation of MPI Source into a Latency-Tolerant Form

Nhat Tan Nguyen Thanh

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Tags: Computer science, CUDA, Linear Algebra, MPI, nVidia, Package, Tesla K20, Thesis

December 15, 2014 by hgpu

Heuristics for Conversion Process of GPU’s Kernels for Multiples Kernels with Concurrent Optimization Divergence

Jose Ritomar Carneiro Torquato, Esteban Walter Gonzalez Clua

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 680, Performance, Tesla K10, Tesla K20

December 14, 2014 by hgpu

Locality-Aware Automatic Parallelization for GPGPU with OpenHMPP Directives

Jose M. Andion, Manuel Arenaz, Francois Bodin, Gabriel Rodriguez, Juan Tourino

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Tags: Computer science, CUDA, Heterogeneous systems, Matrix multiplication, nVidia, Tesla S1070, Tesla S2050

December 14, 2014 by hgpu

Acceleration of Hessenberg Reduction for Nonsymmetric Matrix

Hesamaldin Nekouei

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Tags: Algorithms, Computer science, CUDA, FFT, Linear Algebra, nVidia, nVidia GeForce GT 635 M, Thesis

December 14, 2014 by hgpu

Graph Processing on GPU

Zhang Jingbo

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Tags: Algorithms, Computer science, CUDA, Data mining, Graph theory, Machine learning, nVidia, nVidia GeForce 9400 GT, nVidia GeForce GT 330, nVidia GeForce GT 520, Thesis

December 14, 2014 by hgpu

Real-Time Grasp Detection Using Convolutional Neural Networks

Joseph Redmon, Anelia Angelova

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Tags: CNN, Computer science, CUDA, Machine learning, Neural networks, nVidia, Tesla K20

December 12, 2014 by hgpu

A Survey Paper on Solving TSP using Ant Colony Optimization on GPU

Khushbu Khatri, Vinit Kumar Gupta

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Tags: Algorithms, Ant colony optimization, Computer science, CUDA, nVidia

December 12, 2014 by hgpu

cuLGT: Lattice Gauge Fixing on GPUs

Hannes Vogt, Mario Schrock

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Tags: Computational Physics, CUDA, High Energy Physics - Lattice, nVidia, nVidia GeForce GTX 580, nVidia GeForce GTX 680, nVidia GeForce GTX Titan, Package, Physics, Tesla K20

December 12, 2014 by hgpu

Compiler-Level Explicit Cache for a GPGPU Programming Framework

Tomoharu Kamiya, Takanori Maruyama, Kazuhiko Ohno, Masaki Matsumoto

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Tags: Compilers, Computer science, CUDA, nVidia, nVidia GeForce GTX 680, nVidia GeForce GTX Titan, Tesla C2050, Tesla K20

December 12, 2014 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Bayesian neural networks for detecting epistasis in genetic association studies

Analysis and Optimization Techniques for Massively Parallel Processors

Performance Comparison of GPUs with a Genetic Algorithm based on CUDA

Bamboo: Automatic Translation of MPI Source into a Latency-Tolerant Form

Heuristics for Conversion Process of GPU’s Kernels for Multiples Kernels with Concurrent Optimization Divergence

Locality-Aware Automatic Parallelization for GPGPU with OpenHMPP Directives

Acceleration of Hessenberg Reduction for Nonsymmetric Matrix

Graph Processing on GPU

Real-Time Grasp Detection Using Convolutional Neural Networks

A Survey Paper on Solving TSP using Ant Colony Optimization on GPU

cuLGT: Lattice Gauge Fixing on GPUs

Compiler-Level Explicit Cache for a GPGPU Programming Framework

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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