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A GPGPU Implementation of Approximate String Matching with Regular Expression Operators and Comparison with Its FPGA Implementation

Yuichiro Utan, Masato Inagi, Shin'ichi Wakabayashi, Shinobu Nagayama

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Tags: Algorithms, Computer science, CUDA, Databases, FPGA, nVidia, String matching, Tesla C2070

September 5, 2012 by hgpu

Parallelization of KMP String Matching Algorithm on Different SIMD architectures: Multi-Core and GPGPU’s

Akhtar Rasool, Nilay Khare

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Tags: Algorithms, ATI, Computer science, OpenCL, Pattern recognition, String matching

August 4, 2012 by hgpu

GPU-to-GPU and Host-to-Host multipattern string matching on a GPU

Xinyan Zha, Sartaj Sahni

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Tags: Algorithms, Computer science, CUDA, nVidia, String matching, Tesla

August 3, 2012 by hgpu

Parallelization of Myers Fast Bit-Vector Algorithm using GPGPU

Lars Langner

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 460, OpenCL, Sequence alignment, String matching, Thesis

January 27, 2012 by hgpu

Multipattern String Matching On A GPU

Xinyan Zha, Sartaj Sahni

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GT 200, String matching

January 24, 2012 by hgpu

PFAC Library: GPU-based string matching algorithm

Chen-Hsiung Liu, Lung-Sheng Chien, Shih-Chieh Chang, Wing-Kai Hon

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Source codes

Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 480, Package, String matching

December 27, 2011 by hgpu

Performance Analysis of GPU compared to Single-core and Multi-core CPU for Natural Language Applications

Shubham Gupta, M.Rajasekhara Babu

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Tags: Computer science, CUDA, High-level Languages, nVidia, nVidia GeForce GT 210 M, OpenMP, Performance, String matching

December 6, 2011 by hgpu

Accelerating String Matching Using Multi-Threaded Algorithm on GPU

Cheng-Hung Lin, Sheng-Yu Tsai, Chen-Hsiung Liu, Shih-Chieh Chang, Jyuo-Min Shyu

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Tags: Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 295, Security, String matching

September 2, 2011 by hgpu

Challenging cloning related problems with GPU-based algorithms

Thierry Lavoie, Michael Eilers-Smith, Ettore Merlo

Tags: Computer science, Software Engineering, String matching

August 26, 2011 by hgpu

CUgrep: A GPU-based high performance multi-string matching system

Jiangfeng Peng, Hu Chen

Tags: Algorithms, Computer science, CUDA, nVidia, String matching

May 13, 2011 by hgpu

The GPU-based String Matching System in Advanced AC Algorithm

Jiangfeng Peng, Hu Chen, Shaohuai Shi

Tags: Algorithms, Computer science, CUDA, nVidia, String matching

May 9, 2011 by hgpu

CANSCID-CUDA

Michael Steffen, Veerendra Allada, Phillip Jones and Joseph Zambreno

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Tags: Computer science, CUDA, nVidia, Python, String matching, Tesla

April 8, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

A GPGPU Implementation of Approximate String Matching with Regular Expression Operators and Comparison with Its FPGA Implementation

Parallelization of KMP String Matching Algorithm on Different SIMD architectures: Multi-Core and GPGPU’s

GPU-to-GPU and Host-to-Host multipattern string matching on a GPU

Parallelization of Myers Fast Bit-Vector Algorithm using GPGPU

Multipattern String Matching On A GPU

PFAC Library: GPU-based string matching algorithm

Performance Analysis of GPU compared to Single-core and Multi-core CPU for Natural Language Applications

Accelerating String Matching Using Multi-Threaded Algorithm on GPU

Challenging cloning related problems with GPU-based algorithms

CUgrep: A GPU-based high performance multi-string matching system

The GPU-based String Matching System in Advanced AC Algorithm

CANSCID-CUDA

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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