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Computational Biology and Applied Bioinformatics

Heitor Silverio Lopes, Leonardo Magalhaes Cruz

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Tags: Bioinformatics, Biology, Book, Computational biology, CUDA, nVidia, Review, Sequence alignment, Spectrometry

October 23, 2011 by hgpu

STT-RAM for Shared Memory in GPUs

Prateeksha Satyamoorthy

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Tags: Benchmarking, Computer science, CUDA, Memory, nVidia, nVidia GeForce GTX 285, OpenCL, Thesis

October 23, 2011 by hgpu

Dataflow-based Design and Implementation of Image Processing Applications

Chung-Ching Shen, William Plishker, Shuvra S. Bhattacharyya

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Tags: CUDA, DSP, FPGA, Image processing, nVidia, nVidia GeForce GTX 285, Signal processing

October 23, 2011 by hgpu

Accelerating Component-Based Dataflow Middleware with Adaptivity and Heterogeneity

Timothy D. R. Hartley

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia Quadro FX 5600, Optimization, Performance, Thesis

October 22, 2011 by hgpu

Implementing a Preconditioned Iterative Linear Solver Using Massively Parallel Graphics Processing Units

Amirhassan Asgari Kamiabad

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Tags: Computer science, Conjugate gradient solver, CUDA, nVidia, nVidia GeForce GTX 280, Power Systems Simulation, Thesis

October 22, 2011 by hgpu

GPU performance prediction using parametrized models

Andreas Resios

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 460, Optimization, Performance, Thesis

October 22, 2011 by hgpu

CUDA Application Design and Development

Rob Farber

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Tags: Book, Computer science, CUDA, nVidia, Review, Software Engineering

October 22, 2011 by hgpu

Accelerating molecular docking and binding site mapping using FPGAs and GPUs

Bharat Sukhwani

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Tags: Algorithms, Biology, Biomechanics, CUDA, FPGA, Molecular modeling, nVidia, Tesla C1060, Thesis

October 22, 2011 by hgpu

Hardware Transactional Memory for GPU Architectures

Wilson W. L. Fung, Inderpreet Singh, Andrew Brownsword, Tor M. Aamodt

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Tags: Bloom filter, Computer science, CUDA, Memory, nVidia, nVidia Quadro FX 5800, OpenCL, Performance, Programming techniques

October 22, 2011 by hgpu

Concurrent Algorithms and Data Structures for Many-Core Processors

Daniel Cederman

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Tags: Algorithms, Computer science, nVidia, nVidia GeForce 8600 GTS, nVidia GeForce 8800 GTX, Performance, Sorting, Thesis

October 21, 2011 by hgpu

Solving Linear Recurrences on Hybrid GPU Accelerated Manycore Systems

Przemyslaw Stpiczynski

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Tags: Algorithms, BLAS, Computer science, CUDA, Hybrid computing, Linear Algebra, nVidia, Tesla C2050

October 21, 2011 by hgpu

Analysis and Implementation of eSTREAM and SHA-3 Cryptographic Algorithms

Deian Stefan

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Tags: Algorithms, Benchmarking, Computer science, CUDA, nVidia, nVidia GeForce GTX 295, Optimization, Security, Stream Ciphers, Thesis

October 21, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

See all packages

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high performance computing on graphics processing units: hgpu.org

Computational Biology and Applied Bioinformatics

STT-RAM for Shared Memory in GPUs

Dataflow-based Design and Implementation of Image Processing Applications

Accelerating Component-Based Dataflow Middleware with Adaptivity and Heterogeneity

Implementing a Preconditioned Iterative Linear Solver Using Massively Parallel Graphics Processing Units

GPU performance prediction using parametrized models

CUDA Application Design and Development

Accelerating molecular docking and binding site mapping using FPGAs and GPUs

Hardware Transactional Memory for GPU Architectures

Concurrent Algorithms and Data Structures for Many-Core Processors

Solving Linear Recurrences on Hybrid GPU Accelerated Manycore Systems

Analysis and Implementation of eSTREAM and SHA-3 Cryptographic Algorithms

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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