high performance computing on graphics processing units: hgpu.org

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Brownian dynamics simulations on CPU and GPU with BD_BOX

Maciej Dlugosz, Pawel Zielinski, Joanna Trylska

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Tags: Chemistry, CUDA, Molecular dynamics, MPI, nVidia, OpenMP, Package

June 16, 2011 by hgpu

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Takashi Uneyama

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Tags: Condensed matter, CUDA, nVidia, Physics, Soft Condensed Matter, Tesla C1060

June 16, 2011 by hgpu

Parallel cross-layer optimization of high-level synthesis and physical design

James Williamson, Yinghai Lu, Li Shang, Hai Zhou, Xuan Zeng

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Tags: CAD, Computer science, CUDA, Electronic design automation, nVidia, Tesla C1060

June 15, 2011 by hgpu

Loose capacity-constrained representatives for the qualitative visual analysis in molecular dynamics

Steffen Frey, Thomas Schlomer, Sebastian Grottel, Carsten Dachsbacher, Oliver Deussen, Thomas Ertl

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Tags: Computer science, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 480, Visualization, Voronoi diagram

June 15, 2011 by hgpu

Accelerating Genome-Wide Association Studies Using CUDA Compatible Graphics Processing Units

Rui Jiang, Feng Zeng, Wangshu Zhang, Xuebing Wu, Zhihong Yu

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Tags: Bioinformatics, Biology, CUDA, Genetics, nVidia, nVidia GeForce GTX 280

June 15, 2011 by hgpu

Accelerating Viola-Jones Face Detection to FPGA-Level Using GPUs

Daniel Hefenbrock, Jason Oberg, Nhat Tan Nguyen Thanh, Ryan Kastner, Scott B. Baden

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Tags: Computer science, Computer vision, CUDA, FPGA, GPU cluster, Image recognition, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 295

June 15, 2011 by hgpu

Pedestrian detection system based on stereo vision for mobile robot

Bodam Nam, Sung-il Kang, Hyunki Hong

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Tags: Computer science, Computer vision, nVidia, nVidia GeForce GTX 260 M, Stereo vision

June 15, 2011 by hgpu

Real-time numerical dispersion compensation using graphics processing unit for Fourier-domain optical coherence tomography

K. Zhang, J.U. Kang

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Tags: nVidia, nVidia GeForce GTX 580, Physics, Tomography

June 14, 2011 by hgpu

Parallelizing Peptide-Spectrum scoring using modern graphics processing units

Jian Zhang, I. McQuillan, FangXiang Wu

Tags: Biology, CUDA, Macromolecule, nVidia, Spectrometry

June 14, 2011 by hgpu

A Highly Scalable Solution of an NP-Complete Problem Using CUDA

Saiyedul Islam, Raghav Tandon, Shashank Singh, Alok Misra

Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 260, SAT

June 14, 2011 by hgpu

In Situ Power Analysis of General Purpose Graphical Processing Units

M.Z. Shaikh, M. Gregoire, W. Li, M. Wroblewski, S. Simon

Tags: Computer science, CUDA, Energy-efficient computing, nVidia, Performance

June 14, 2011 by hgpu

A comparative study of GPU programming models and architectures using neural networks

Vivek Pallipuram, Mohammad Bhuiyan, Melissa Smith

Tags: ATI, Computer science, CUDA, Neural networks, nVidia, OpenCL, Performance, Tesla C2050

June 14, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

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high performance computing on graphics processing units: hgpu.org

Brownian dynamics simulations on CPU and GPU with BD_BOX

Single Chain Slip-Spring Model for Fast Rheology Simulations of Entangled Polymers on GPU

Parallel cross-layer optimization of high-level synthesis and physical design

Loose capacity-constrained representatives for the qualitative visual analysis in molecular dynamics

Accelerating Genome-Wide Association Studies Using CUDA Compatible Graphics Processing Units

Accelerating Viola-Jones Face Detection to FPGA-Level Using GPUs

Pedestrian detection system based on stereo vision for mobile robot

Real-time numerical dispersion compensation using graphics processing unit for Fourier-domain optical coherence tomography

Parallelizing Peptide-Spectrum scoring using modern graphics processing units

A Highly Scalable Solution of an NP-Complete Problem Using CUDA

In Situ Power Analysis of General Purpose Graphical Processing Units

A comparative study of GPU programming models and architectures using neural networks

Recent source codes

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

Gaia AVU-GSR

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

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