high performance computing on graphics processing units: hgpu.org

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Using the physics-based rendering toolkit for medical reconstruction

Steven Bergner, Eric Dagenais, Anna Celler, Torsten Moller

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Tags: Algorithms, Image reconstruction, Medicine, nVidia, nVidia GeForce 6600 GT, OpenGL, Package, Rendering, Tomography

August 12, 2011 by hgpu

Hyperfast Parallel–Beam Backprojection

Marc Kachelriess, Michael Knaup, Olivier Bockenbach

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Tags: Algorithms, Cell processor, Computer science, Data mining, Distributed computing, Image reconstruction, Nearest neighbour, Performance, Tomography

August 2, 2011 by hgpu

Real time image reconstruction using GPUs for a surgical PET imaging probe system

S.S. Huh, Li Han, W.L. Rogers, N.H. Clinthorne

Tags: CUDA, Image reconstruction, Medicine, Monte Carlo simulation, nVidia, nVidia GeForce 9800 GTX, PET, Tomography

July 22, 2011 by hgpu

System integration of FastSPECT III, a dedicated SPECT rodent-brain imager based on BazookaSPECT detector technology

Brian W. Miller, Lars R. Furenlid, Stephen K. Moore, H. Bradford Barber, Vivek V. Nagarkar, Harrison H. Barrett

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Tags: Computed tomography, CT, CUDA, GPU cluster, Image reconstruction, Medicine, nVidia, nVidia GeForce GTX 295, OpenMP, Tomography

July 19, 2011 by hgpu

Towards a unified framework for rapid 3D computed tomography on commodity GPUs

F. Xu, K. Mueller

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Tags: ATI, ATI Radeon 9700, Computed tomography, CT, Medicine, nVidia, Tomography, Visualization

July 17, 2011 by hgpu

Graphics processing unit parallel accelerated solution of the discrete ordinates for photon transport in biological tissues

Kuan Peng, Xinbo Gao, Xiaochao Qu, Nunu Ren, Xueli Chen, Xiaowei He, Xiaorei Wang, Jimin Liang, Jie Tian

Tags: Biology, CUDA, Image reconstruction, nVidia, nVidia GeForce GTX 260, Optics, Tomography

July 12, 2011 by hgpu

Implementation of usual computerized tomography methods on GPU using the Compute Unified Device Architecture (CUDA)

Benoit Recur, Pascal Desbarats, Jean-Philippe Domenger

Tags: CUDA, Image processing, Medicine, nVidia, Tomography

July 9, 2011 by hgpu

Graphics processing unit accelerated non-uniform fast Fourier transform for ultrahigh-speed, real-time Fourier-domain OCT

Kang Zhang, Jin U. Kang

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Tags: CUDA, FFT, Image processing, Medicine, nVidia, nVidia GeForce GTX 480, Optics, Tomography

July 1, 2011 by hgpu

GPU accelerated rotation-based emission tomography reconstruction

S. Pedemonte, A. Bousse, K. Erlandsson, M. Modat, S. Arridge, B. F. Hutton, S. Ourselin

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Tags: CUDA, Image reconstruction, Medicine, nVidia, Package, Tomography

June 21, 2011 by hgpu

Real-time numerical dispersion compensation using graphics processing unit for Fourier-domain optical coherence tomography

K. Zhang, J.U. Kang

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Tags: nVidia, nVidia GeForce GTX 580, Physics, Tomography

June 14, 2011 by hgpu

The Parallel Processing Based on CUDA for Convolution Filter FDK Reconstruction of CT

Benyi Shi, Sihai Chen, Feifei Huang, Cheng Wang, Kun Bi

Tags: Computed tomography, CT, CUDA, Image reconstruction, Medicine, nVidia, Tomography

June 1, 2011 by hgpu

GPU-based parallel-beam and cone-beam forward- and backprojection using CUDA

Michael Knaup, Sven Steckmann, Marc Kachelriess

Tags: CUDA, Image processing, Image reconstruction, Medicine, nVidia, Tomography

May 29, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Using the physics-based rendering toolkit for medical reconstruction

Hyperfast Parallel–Beam Backprojection

Real time image reconstruction using GPUs for a surgical PET imaging probe system

System integration of FastSPECT III, a dedicated SPECT rodent-brain imager based on BazookaSPECT detector technology

Towards a unified framework for rapid 3D computed tomography on commodity GPUs

Graphics processing unit parallel accelerated solution of the discrete ordinates for photon transport in biological tissues

Implementation of usual computerized tomography methods on GPU using the Compute Unified Device Architecture (CUDA)

Graphics processing unit accelerated non-uniform fast Fourier transform for ultrahigh-speed, real-time Fourier-domain OCT

GPU accelerated rotation-based emission tomography reconstruction

Real-time numerical dispersion compensation using graphics processing unit for Fourier-domain optical coherence tomography

The Parallel Processing Based on CUDA for Convolution Filter FDK Reconstruction of CT

GPU-based parallel-beam and cone-beam forward- and backprojection using CUDA

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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