high performance computing on graphics processing units: hgpu.org

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Parallel smoothing of quad meshes

Young Yeo, Tianyun Ni, Ashish Myles, Vineet Goel, Jorg Peters

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Tags: 3D Graphics and Realism, Computer science, DirectX, nVidia, nVidia GeForce 8800 GTX, Shaders, Visualization

November 27, 2010 by hgpu

Quantum computer simulation using the CUDA programming model

Eladio Gutierrez, Sergio Romero, Maria A. Trenas, Emilio L. Zapata

Tags: Computer science, CUDA, nVidia, Quantum computing

November 27, 2010 by hgpu

Predictive Runtime Code Scheduling for Heterogeneous Architectures

Victor Jimenez, Lluis Vilanova, Isaac Gelado, Marisa Gil, Grigori Fursin, Nacho Navarro

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 8600 GTS, Task scheduling

November 27, 2010 by hgpu

Exploiting graphical processing units for data-parallel scientific applications

A. Leist, D. P. Playne, K. A. Hawick

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Tags: Computer science, CUDA, Field equations, Graph theory, nVidia, nVidia GeForce 8800 GTS

November 27, 2010 by hgpu

CUDA-MEME: Accelerating Motif Discovery in Biological Sequences Using CUDA-enabled Graphics Processing Units

Yongchao Liu, Bertil Schmidt, Weiguo Liu, Douglas L. Maskell

Tags: Biology, CUDA, nVidia, nVidia GeForce GTX 280, Pattern recognition

November 27, 2010 by hgpu

Performance Analysis of IBM Cell Broadband Engine on Sequence Alignment

Yang Song, Gregory M. Striemer, Ali Akoglu

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Tags: Bioinformatics, Biology, Cell processor, CUDA, nVidia, Sequence alignment, Smith-Waterman algorithm, Tesla C870

November 27, 2010 by hgpu

Molecular dynamics simulation of complex multiphase flow on a computer cluster with GPUs

Feiguo Chen, Wei Ge, Jinghai Li

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Tags: Chemistry, CUDA, GPU cluster, Molecular dynamics, MPI, nVidia, Tesla C870

November 27, 2010 by hgpu

Solving Sparse Linear Systems on NVIDIA Tesla GPUs

Mingliang Wang, Hector Klie, Manish Parashar, Hari Sudan

Tags: Computer science, CUDA, nVidia, nVidia GeForce GTX 280, Sparse matrix, Tesla T10P

November 27, 2010 by hgpu

The Virtual Marathon: Parallel Computing Supports Crowd Simulations

Erdal Yilmaz, Veysi Isler, Yasemin Y. Cetin

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Tags: Computer science, nVidia, nVidia GeForce GTX 280, OpenGL, Visualization

November 27, 2010 by hgpu

Harnessing graphics processors for the fast computation of acoustic likelihoods in speech recognition

Paul R. Dixon, Tasuku Oonishi, Sadaoki Furui

Tags: Acoustics, CUDA, nVidia, Signal processing, Speech recognition

November 27, 2010 by hgpu

Evaluating the use of GPUs in liver image segmentation and HMMER database searches

J. P. Walters, V. Balu, S. Kompalli, V. Chaudhary

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Tags: CUDA, Image processing, nVidia, nVidia GeForce 8800 GTX

November 26, 2010 by hgpu

Triangular matrix inversion on Graphics Processing Unit

Florian Ries, Tommaso De Marco, Matteo Zivieri, Roberto Guerrieri

Tags: Computer science, CUDA, Linear Algebra, Matrix inversion, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 295

November 26, 2010 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

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high performance computing on graphics processing units: hgpu.org

Parallel smoothing of quad meshes

Quantum computer simulation using the CUDA programming model

Predictive Runtime Code Scheduling for Heterogeneous Architectures

Exploiting graphical processing units for data-parallel scientific applications

CUDA-MEME: Accelerating Motif Discovery in Biological Sequences Using CUDA-enabled Graphics Processing Units

Performance Analysis of IBM Cell Broadband Engine on Sequence Alignment

Molecular dynamics simulation of complex multiphase flow on a computer cluster with GPUs

Solving Sparse Linear Systems on NVIDIA Tesla GPUs

The Virtual Marathon: Parallel Computing Supports Crowd Simulations

Harnessing graphics processors for the fast computation of acoustic likelihoods in speech recognition

Evaluating the use of GPUs in liver image segmentation and HMMER database searches

Triangular matrix inversion on Graphics Processing Unit

Recent source codes

gpuPairHMM: Ultra-fast GPU-based PairHMM for DNA Variant Calling

Gaia AVU-GSR

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

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