high performance computing on graphics processing units: hgpu.org

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Improving the Mapping of Smith-Waterman Sequence Database Searches onto CUDA-Enabled GPUs

Liang-Tsung Huang, Chao-Chin Wu, Lien-Fu Lai, Yun-Ju Li

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Tags: Bioinformatics, Biology, CUDA, Databases, nVidia, Sequence alignment, Smith-Waterman algorithm, Tesla C1060, Tesla K20

June 30, 2015 by hgpu

Toward GPU Accelerated Data Stream Processing

Marcus Pinnecke, David Broneske, Gunter Saake

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Tags: Algorithms, Computer science, Databases, OpenCL

June 24, 2015 by hgpu

Perfect Hashing Structures for Parallel Similarity Searches

Tuan Tu Tran, Mathieu Giraud, Jean-Stephane Varre

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Tags: Algorithms, Computer science, Databases, Filtering, Hashing, nVidia, nVidia GeForce GTX 480, nVidia GeForce GTX Titan, OpenCL

June 16, 2015 by hgpu

Toward GPUs being mainstream in analytic processing: An initial argument using simple scan-aggregate queries

Jason Power, Yinan Li, Mark D. Hill, Jignesh M. Patel, David A. Wood

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Tags: Algorithms, AMD Radeon R7 240, ATI, ATI Radeon HD 7970, Computer science, Databases, Heterogeneous systems, OpenCL

May 22, 2015 by hgpu

A Parallel Tree Pattern Query Processing Algorithm for Graph Databases using a GPGPU

Lila Shnaiderman, Oded Shmueli

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Databases, nVidia, nVidia GeForce GTX 480

April 14, 2015 by hgpu

Local vs. Global Optimization: Operator Placement Strategies in Heterogeneous Environments

Tomas Karnagel, Dirk Habich, Wolfgang Lehner

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Tags: ATI, ATI Radeon HD 7660, Computer science, Databases, Heterogeneous systems, nVidia, OpenCL, Tesla K20

March 18, 2015 by hgpu

A Vision for GPU-accelerated Parallel Computation on Geo-Spatial Datasets

Sushil K. Prasad, Michael McDermott, Satish Puri, Dhara Shah, Danial Aghajarian, Shashi Shekhar, Xun Zhou

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Tags: Computer science, CUDA, Databases, nVidia

February 24, 2015 by hgpu

A Virtual Machine Model for Accelerating Relational Database Joins using a General Purpose GPU

Kevin Angstadt, Ed Harcourt

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Tags: Computer science, CUDA, Databases, nVidia, nVidia GeForce GTX 460, nVidia GeForce GTX 760

February 24, 2015 by hgpu

High performance methods for frequent pattern mining

Lan Vu

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Tags: Computer science, CUDA, Data mining, Databases, nVidia, Tesla C2050, Thesis

February 22, 2015 by hgpu

In-Memory Data Analytics on Coupled CPU-GPU Architectures

Jiong He, Bingsheng He, Mian Lu, Shuhao Zhang

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Tags: Algorithms, Computer science, Databases, OpenCL

February 1, 2015 by hgpu

Performance Analysis of Join Algorithms on GPUs

Ran Rui, Hao Li, Yi-Cheng Tu

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Tags: Algorithms, Computer science, CUDA, Databases, Join, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 980, nVidia GeForce GTX Titan, Performance

January 26, 2015 by hgpu

Indexing of Spatiotemporal Trajectories for Efficient Distance Threshold Similarity Searches on the GPU

Michael Gowanlock, Henri Casanova

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Tags: Astrophysics, Computer science, Databases, nVidia, OpenCL, Tesla C2075

January 19, 2015 by hgpu

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

LLOR: Automatic Repair of OpenMP Programs

LLOR: Automated Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

Unified schemes for directive-based GPU offloading

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

PyOMP: Parallel programming for CPUs and GPUs with OpenMP and Python

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high performance computing on graphics processing units: hgpu.org

Improving the Mapping of Smith-Waterman Sequence Database Searches onto CUDA-Enabled GPUs

Toward GPU Accelerated Data Stream Processing

Perfect Hashing Structures for Parallel Similarity Searches

Toward GPUs being mainstream in analytic processing: An initial argument using simple scan-aggregate queries

A Parallel Tree Pattern Query Processing Algorithm for Graph Databases using a GPGPU

Local vs. Global Optimization: Operator Placement Strategies in Heterogeneous Environments

A Vision for GPU-accelerated Parallel Computation on Geo-Spatial Datasets

A Virtual Machine Model for Accelerating Relational Database Joins using a General Purpose GPU

High performance methods for frequent pattern mining

In-Memory Data Analytics on Coupled CPU-GPU Architectures

Performance Analysis of Join Algorithms on GPUs

Indexing of Spatiotemporal Trajectories for Efficient Distance Threshold Similarity Searches on the GPU

Recent source codes

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

LLOR: Automatic Repair of OpenMP Programs

Solomon: Simple Off-LOading Macros Orchestrating multiple Notations

CLUEstering: a high-performance density-based clustering library for scientific computing

PyOMP: OpenMP for Python in Numba

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