high performance computing on graphics processing units: hgpu.org

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GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Ansel L. Blumers, Yu-Hang Tang, Zhen Li, Xuejin Li, George E. Karniadakis

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Tags: Biological Physics, Computational Physics, CUDA, MPI, nVidia, Package, Physics, Tesla K20

November 22, 2016 by hgpu

Efficient Communications in Training Large Scale Neural Networks

Linnan Wang, Wei Wu, George Bosilca, Richard Vuduc, Zenglin Xu

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Tags: Caffe, Computer science, CUDA, Deep learning, MPI, Neural networks, nVidia, OpenMPI, Performance

November 16, 2016 by hgpu

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

Jerry Watkins, Irina Tezaur

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Tags: CUDA, Earth and Space Sciences, MPI, nVidia, OpenMP, performance portability, Physics, Tesla K20, Tesla K80

November 8, 2016 by hgpu

MILC staggered conjugate gradient performance on Intel KNL

Carleton DeTar, Douglas Doerfler, Steven Gottlieb, Ashish Jha, Dhiraj Kalamkar, Ruizi Li, Doug Toussaint

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Tags: Computational Physics, Data parallelism, High Energy Physics - Lattice, Intel Xeon Phi, MPI, OpenMP, Physics

November 3, 2016 by hgpu

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

Vladimir Loncar, Luis E. Young-S., Srdjan Skrbic, Paulsamy Muruganandam, Sadhan K. Adhikari, Antun Balaz

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Tags: Condensed matter, CUDA, MPI, nVidia, OpenMP, Package, Physics, Tesla M2090

October 22, 2016 by hgpu

BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images

Pilar Cossio, David Rohr, Fabio Baruffa, Markus Rampp, Volker Lindenstruth, Gerhard Hummer

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Tags: Bayesian, Biology, Biomolecules, CUDA, Electron microscopy, Heterogeneous systems, Medicine, Microscopy, MPI, nVidia, nVidia GeForce GTX Titan, OpenMP, Package, Tesla K20, Tomography

October 8, 2016 by hgpu

MCS 572: Introduction to Supercomputing

Jan Verschelde

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Tags: Algorithms, Computer science, CUDA, MPI, Numerical Analysis, nVidia, nVidia GeForce 9400 M, OpenMP, Package, Tesla C2050, Tesla C2070, Tesla K20, Tutorial

September 22, 2016 by hgpu

An efficient numerical method for solving the Boltzmann equation in multidimensions

Giacomo Dimarco, Raphael Loubere, Jacek Narski, Thomas Rey

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Tags: Algorithms, Boltzmann equation, cfd, CUDA, Fluid dynamics, Mathematics, MPI, Numerical Analysis, nVidia, OpenMP, Physics

September 13, 2016 by hgpu

OpenSBLI: A framework for the automated derivation and parallel execution of finite difference solvers on a range of computer architectures

Christian T. Jacobs, Satya P. Jammy, Neil D. Sandham

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Tags: cfd, Code generation, Computer science, CUDA, Finite difference, Fluid dynamics, Mathematical Software, MPI, nVidia, OpenCL, Tesla K40

September 10, 2016 by hgpu

MetaMorph: A Library Framework for Interoperable Kernels on Multi- and Many-core Clusters

Ahmed E. Helal, Paul Sathre, Wu-chun Feng

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Tags: ATI, ATI Radeon HD 7970, Computer science, CUDA, Fluid dynamics, Heterogeneous systems, Intel Xeon Phi, MPI, nVidia, OpenCL, performance portability, Tesla K20

August 23, 2016 by hgpu

Particle-in-cell algorithms for plasma simulations on heterogeneous architectures

Xavier Saez Pous

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Tags: ARM, Computational Physics, Computer science, Heterogeneous systems, MPI, OpenCL, Particle-in-cell methods, Plasma physics, Thesis

July 30, 2016 by hgpu

Many-Core Algorithms for Combinatorial Optimization

Francesco Strappaveccia

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Tags: Algorithms, Computer science, CUDA, MPI, nVidia, nVidia GeForce GTX 570, nVidia GeForce GTX 770, nVidia GeForce GTX Titan, OpenMP, Optimization, Path problems, Thesis

July 28, 2016 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Efficient Communications in Training Large Scale Neural Networks

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

MILC staggered conjugate gradient performance on Intel KNL

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

BioEM: GPU-accelerated computing of Bayesian inference of electron microscopy images

MCS 572: Introduction to Supercomputing

An efficient numerical method for solving the Boltzmann equation in multidimensions

OpenSBLI: A framework for the automated derivation and parallel execution of finite difference solvers on a range of computer architectures

MetaMorph: A Library Framework for Interoperable Kernels on Multi- and Many-core Clusters

Particle-in-cell algorithms for plasma simulations on heterogeneous architectures

Many-Core Algorithms for Combinatorial Optimization

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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