13373
Tianren Wang, Yun Jing
This paper presents a numerical study on a fast marching method based back projection reconstruction algorithm for photoacoustic tomography in heterogeneous media. Transcranial imaging is used here as a case study. To correct for the phase aberration from the heterogeneity (i.e., skull), the fast marching method is adopted to compute the phase delay based on […]
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Albert Haque
Cardiac dysrhythmia is responsible for over half a million deaths in the United States annually. In this work, we evaluate the performance of neural networks on classifying electrocardiogram (ECG) sequences as normal or abnormal (arrhythmia). Using neural networks as our primary learning model, we explain our model’s performance and discuss hyperparameter tuning. Comparing the results […]
Thomas Kovac
As multiple sclerosis is known to cause atrophy and deformation in the brain, it also influences the shape and size of the corpus callosum. Longitudinal studies try to quantify these changes using medical image analysis techniques for measuring and analyzing the shape and size of a corpus callosum cross-sechtion embedded in a specially selected measurement […]
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Seongjin Park, Jeongjin Lee, Hyunna Lee, Juneseuk Shin, Jinwook Seo, Kyoung Ho Lee, Yeong-Gil Shin, Bohyoung Kim
This paper presents a novel method for parallelizing the seeded region growing (SRG) algorithm using Compute Unified Device Architecture (CUDA) technology, with intent to overcome the theoretical weakness of SRG algorithm of its computation time being directly proportional to the size of a segmented region. The segmentation performance of the proposed CUDA-based SRG is compared […]
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M. Leeser, S. Mukherjee, J. Brock
Biomedical image reconstruction applications require producing high fidelity images in or close to real-time. We have implemented reconstruction of three dimensional conebeam computed tomography(CBCT) with two dimensional projections. The algorithm takes slices of the target, weights and filters them to backproject the data, then creates the final 3D volume. We have implemented the algorithm using […]
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Yangping Wang, Lian Li, Jianwu Dang, Chong Deng, Xiaogang Du
Dose Volume Histogram(DVH) is necessary for evaluating radiotherapy planning. With the increase of patient CT slices and the development of intensity-modulated radiation therapy(IMRT) technology, statistical process of DVH requires a large number of cubic interpolation calculation, and the sequential single threaded DVH code on the CPU can not meet the real-time requirement. The paper presents […]
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Christos G Xanthis, Ioannis E Venetis, Anthony H Aletras
BACKGROUND: MRI physics simulators have been developed in the past for optimizing imaging protocols and for training purposes. However, these simulators have only addressed motion within a limited scope. The purpose of this study was the incorporation of realistic motion, such as cardiac motion, respiratory motion and flow, within MRI simulations in a high performance […]
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Styliani Loukatou, Louis Papageorgiou, Paraskevas Fakourelis, Arianna Filntisi, Eleftheria Polychronidou, Ioannis Bassis, Vasileios Megalooikonomou, Wojciech Makalowski, Dimitrios Vlachakis, Sophia Kossida
Bioinformatics is the scientific field that focuses on the application of computer technology to the management of biological information. Over the years, bioinformatics applications have been used to store, process and integrate biological and genetic information, using a wide range of methodologies. One of the most de novo techniques used to understand the physical movements […]
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Nagaveni V, G T Raju
The main aim of string matching algorithm is to locate the appearance of a specific pattern in an array of larger size text. String matching algorithms has been used in many applications such as DNA analysis. This report introduces a new approach of string matching algorithm to detect the occurrence of several gene patterns in […]
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D. Akgün, Ü. Sakoğlu, M. Mete, J. Esquivel, B. Adinoff
Intense computations in engineering and science, especially bioinformatics have been made practical by the recent advances in Graphical Processing Unit (GPU) computing technology. In this study, implementation and performance evaluations for a GPU-accelerated dynamic functional connectivity (DFC) analysis, which is an analysis method for investigating dynamic interactions among different brain networks, is presented. Open Computing […]
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J.-B. Keck, M. Chabanas
A miniature 3D tracked ultrasonic probe has been developed to acquire intra-articular cartilage images under arthroscopic surgical conditions. The aim is to detect cartilaginous lesions (arthritis) and quantify their precise sizes and locations to help the clinician in his diagnostic and his therapeutic decision making. The ultrasonic transducer is tracked by an optical sensor, which […]
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F. Zhu
Brain perfusion weighted images acquired using dynamic contrast studies have an important clinical role in acute stroke diagnosis and treatment decisions. The purpose of my PhD research is to develop novel methodologies for improving the efficiency and quality of brain perfusion-imaging analysis so that clinical decisions can be made more accurately and in a shorter […]
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