high performance computing on graphics processing units: hgpu.org

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GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Ansel L. Blumers, Yu-Hang Tang, Zhen Li, Xuejin Li, George E. Karniadakis

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Tags: Biological Physics, Computational Physics, CUDA, MPI, nVidia, Package, Physics, Tesla K20

November 22, 2016 by hgpu

Celeris: A GPU-accelerated open source software with a Boussinesq-type wave solver for real-time, interactive simulation and visualization

Sasan Tavakkol, Patrick Lynett

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Tags: cfd, DirectX, Finite difference, Fluid dynamics, HLSL, nVidia, nVidia Quadro K600, Package, Physics, Rendering, Visualization

November 22, 2016 by hgpu

Lattice QCD simulations using the OpenACC platform

Pushan Majumdar

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Tags: CUDA, HEP, High Energy Physics - Lattice, nVidia, OpenACC, Physics, QCD, Tesla X2090

November 19, 2016 by hgpu

Data Acquisition with GPUs: The DAQ for the Muon g-2 Experiment at Fermilab

W. Gohn

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Tags: CUDA, Data acquisition, nVidia, Physics, Tesla K40

November 16, 2016 by hgpu

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

Jerry Watkins, Irina Tezaur

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Tags: CUDA, Earth and Space Sciences, MPI, nVidia, OpenMP, performance portability, Physics, Tesla K20, Tesla K80

November 8, 2016 by hgpu

grim: A Flexible, Conservative Scheme for Relativistic Fluid Theories

Mani Chandra, Francois Foucart, Charles F. Gammie

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Tags: Astrophysics, Magnetohydrodynamics, nVidia, OpenCL, Package, Physics, Tesla K20

November 5, 2016 by hgpu

MILC staggered conjugate gradient performance on Intel KNL

Carleton DeTar, Douglas Doerfler, Steven Gottlieb, Ashish Jha, Dhiraj Kalamkar, Ruizi Li, Doug Toussaint

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Tags: Computational Physics, Data parallelism, High Energy Physics - Lattice, Intel Xeon Phi, MPI, OpenMP, Physics

November 3, 2016 by hgpu

A hybrid algorithm for parallel molecular dynamics simulations

Chris M. Mangiardi, Ralf Meyer

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Tags: Condensed matter, Intel Xeon Phi, Materials Science, Molecular dynamics

November 3, 2016 by hgpu

GOTHIC: Gravitational oct-tree code accelerated by hierarchical time step controlling

Yohei Miki, Masayuki Umemura

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Tags: Astrophysics, CUDA, Gravitation, Instrumentation and Methods for Astrophysics, N-body simulation, nVidia, nVidia GeForce GTX Titan X, Tesla K20, Tesla M2090

October 29, 2016 by hgpu

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

Vladimir Loncar, Luis E. Young-S., Srdjan Skrbic, Paulsamy Muruganandam, Sadhan K. Adhikari, Antun Balaz

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Tags: Condensed matter, CUDA, MPI, nVidia, OpenMP, Package, Physics, Tesla M2090

October 22, 2016 by hgpu

Efficient molecular dynamics simulations with many-body potentials on graphics processing units

Zheyong Fan, Wei Chen, Ville Vierimaa, Ari Harju

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Tags: Computational Physics, CUDA, Materials Science, Molecular dynamics, nVidia, Physics, Tesla K40

October 15, 2016 by hgpu

Efficient and portable acceleration of quantum chemical many-body methods in mixed floating point precision using OpenACC compiler directives

Janus Juul Eriksen

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Tags: Chemical Physics, Chemistry, Mixed precision, nVidia, OpenACC, Physics, Tesla K40

September 27, 2016 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

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high performance computing on graphics processing units: hgpu.org

Applications

GPU-accelerated Red Blood Cells Simulations with Transport Dissipative Particle Dynamics

Celeris: A GPU-accelerated open source software with a Boussinesq-type wave solver for real-time, interactive simulation and visualization

Lattice QCD simulations using the OpenACC platform

Data Acquisition with GPUs: The DAQ for the Muon g-2 Experiment at Fermilab

Performance Portability of the Aeras Atmosphere Model to Next Generation Architectures using Kokkos

grim: A Flexible, Conservative Scheme for Relativistic Fluid Theories

MILC staggered conjugate gradient performance on Intel KNL

A hybrid algorithm for parallel molecular dynamics simulations

GOTHIC: Gravitational oct-tree code accelerated by hierarchical time step controlling

OpenMP, OpenMP/MPI, and CUDA/MPI C programs for solving the time-dependent dipolar Gross-Pitaevskii equation

Efficient molecular dynamics simulations with many-body potentials on graphics processing units

Efficient and portable acceleration of quantum chemical many-body methods in mixed floating point precision using OpenACC compiler directives

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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