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Tackling Exascale Software Challenges in Molecular Dynamics Simulations with GROMACS

Pall Szilard, Mark James Abraham, Carsten Kutzner, Berk Hess, Erik Lindahl

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Tags: Algorithms, Biomolecules, Computer science, CUDA, Heterogeneous systems, Molecular dynamics, Molecular simulation, MPI, nVidia, Tesla C2070, Tesla K20

June 5, 2015 by hgpu

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

Fredrik Andersson, Marcus Carlsson, Viktor V. Nikitin

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Tags: Algorithms, CUDA, FFT, Image processing, Mathematics, Numerical Analysis, nVidia, nVidia GeForce GTX 770, Radon transform

June 5, 2015 by hgpu

A Survey of Software Techniques for Using Non-Volatile Memories for Storage and Main Memory Systems

Sparsh Mittal and Jeffrey S. Vetter

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Tags: cpu, flash, high performance computing, Memory, non-volatile memory, storage, supercomputer

June 3, 2015 by sparsh0mittal

Genetically Improved BarraCUDA

W. B. Langdon, Brian Yee Hong Lam

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Tags: Algorithms, Benchmarking, Biology, CUDA, Genomics, nVidia, nVidia GeForce GT 730, Package, Tesla K20, Tesla K40, Tesla K80

June 1, 2015 by hgpu

Research on the fast Fourier transform of image based on GPU

Feifei Shen, Zhenjian Song, Congrui Wu, Jiaqi Geng, Qingyun Wang

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Tags: Algorithms, FFT, Image processing, Mathematical Software, nVidia, nVidia GeForce 8600 GT

June 1, 2015 by hgpu

A Parallel Cellular Automaton Simulation Framework using CUDA

Ryno Fourie

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Tags: Algorithms, Cellular automata, Computer science, CUDA, nVidia, nVidia GeForce GT 650 M, nVidia GeForce GTX 780, Thesis

June 1, 2015 by hgpu

Quantum Chemistry for Solvated Molecules on Graphical Processing Units (GPUs) using Polarizable Continuum Models

Fang Liu, Nathan Luehr, Heather J. Kulik, Todd J. Martinez

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Tags: Biomolecules, Chemical Physics, Chemistry, CUDA, nVidia, nVidia GeForce GTX Titan, Physics

June 1, 2015 by hgpu

Efficient FFT mapping on GPU for radar processing application: modeling and implementation

Mohamed Amine Bergach, Emilien Kofman, Robert de Simone, Serge Tissot, Michel Syska

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Tags: FFT, GPGPU, Intel HD 5200, Intel HD Graphics 4000, OpenCL, SAR

June 1, 2015 by Aminems

Optimized Password Recovery for Encrypted RAR on GPUs

Xiaojing An, Haojun Zhao, Lulu Ding, Zhongrui Fan, Hanyue Wang

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Tags: AES, AMD FirePro W8000, ATI, Computer science, Hashing, OpenCL, Security

May 29, 2015 by hgpu

Large-scale network simulation over heterogeneous computing architecture

Bilel Ben Romdhanne

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Tags: Computer science, CUDA, Heterogeneous systems, nVidia, nVidia GeForce GTX 860, Thesis

May 29, 2015 by hgpu

Design and Optimization of OpenFOAM-based CFD Applications for Hybrid and Heterogeneous HPC Platforms

Amani AlOnazi, David Keyes, Alexey Lastovetsky, Vladimir Rychkov

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Tags: Conjugate gradient solver, CUDA, Fluid dynamics, Heterogeneous systems, MPI, nVidia, nVidia GeForce GTX Titan

May 29, 2015 by hgpu

Lensed: a code for the forward reconstruction of lenses and sources from strong lensing observations

Nicolas Tessore, Fabio Bellagamba, R. Benton Metcalf

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Tags: Astrophysics, OpenCL, Package, Rendering

May 29, 2015 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

Tackling Exascale Software Challenges in Molecular Dynamics Simulations with GROMACS

Fast algorithms and efficient GPU implementations for the Radon transform and the back-projection operator represented as convolution operators

A Survey of Software Techniques for Using Non-Volatile Memories for Storage and Main Memory Systems

Genetically Improved BarraCUDA

Research on the fast Fourier transform of image based on GPU

A Parallel Cellular Automaton Simulation Framework using CUDA

Quantum Chemistry for Solvated Molecules on Graphical Processing Units (GPUs) using Polarizable Continuum Models

Efficient FFT mapping on GPU for radar processing application: modeling and implementation

Optimized Password Recovery for Encrypted RAR on GPUs

Large-scale network simulation over heterogeneous computing architecture

Design and Optimization of OpenFOAM-based CFD Applications for Hybrid and Heterogeneous HPC Platforms

Lensed: a code for the forward reconstruction of lenses and sources from strong lensing observations

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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