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MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Peng Jia, Liming Xuan, Lei Liu, Chaochun Wei

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Tags: Biology, Computational biology, CUDA, Genetics, nVidia, Package, Tesla C1060

January 11, 2012 by hgpu

Petaflop biofluidics simulations on a two million-core system

Massimo Bernaschi, Satoshi Matsuoka, Mauro Bisson, Massimiliano Fatica, Toshio Endo, Simone Melchionna

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Tags: Algorithms, Biology, CUDA, GPU cluster, Medicine, nVidia, Optimization, Tesla M2050

January 11, 2012 by hgpu

Power-performance comparison of single-task driven many-cores

Fuat Keceli, Tali Moreshet, Uzi Vishkin

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Tags: Algorithms, Computer science, CUDA, Energy-efficient computing, nVidia, nVidia GeForce GTX 280

January 11, 2012 by hgpu

Real-time massively parallel processing of spectral optical coherence tomography data on graphics processing units

Marcin Sylwestrzak, Daniel Szlag, Maciej Szkulmowski, Piotr Targowski

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Tags: CUDA, Data acquisition, Medicine, nVidia, nVidia GeForce GTX 285, OpenGL, Rendering, Tomography

January 11, 2012 by hgpu

High Precision Integer Multiplication with a GPU Using Strassen’s Algorithm with Multiple FFT Sizes

Niall Emmart, Charles C. Weems

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Tags: Algorithms, Computer science, CUDA, FFT, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 480, Optimization

January 11, 2012 by hgpu

People detection method using graphics processing units for a mobile robot with an omnidirectional camera

Sungil Kang, Annah Roh, Bodam Nam, Hyunki Hong

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Tags: Algorithms, Computer science, Computer vision, CUDA, nVidia, nVidia GeForce GTX 460, Optical flow

January 10, 2012 by hgpu

Generating, Optimizing, and Scheduling a Compiler Level Representation of Stream Parallelism

Jeffrey M. Fifield

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Tags: Computer science, Heterogeneous systems, OpenCL, Optimization, Thesis

January 10, 2012 by hgpu

Graphics Processor Unit (GPU) Acceleration of Finite-Difference Frequency-Domain (FDFD) Method

V. Demir

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Tags: Algorithms, CUDA, Electrodynamics, FDTD, Finite-difference time-domain, nVidia, Tesla C1060

January 10, 2012 by hgpu

A Hybrid Circular Queue Method for Iterative Stencil Computations on GPUs

Yang Yang, Hui-Min Cui, Xiao-Bing Feng, Jing-Ling Xue

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Tags: Computer science, CUDA, nVidia, Performance, Tesla C2050

January 10, 2012 by hgpu

Parallelizing Kernel Polynomial Method Applying Graphics Processing Units

Shixun Zhang, Shinichi Yamagiwa, Masahiko Okumura, Seiji Yunoki

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Tags: Algorithms, Chemistry, Condensed matter, CUDA, nVidia, Physics, Tesla C2050

January 10, 2012 by hgpu

Acceleration of AES encryption on CUDA GPU

Keisuke Iwai, Naoki Nishikawa, Takakazu Kurokawa

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Tags: AES, Algorithms, Computer science, CUDA, nVidia, nVidia GeForce GTX 285, Security

January 10, 2012 by hgpu

Providing Source Code Level Portability Between CPU and GPU with MapCG

Chun-Tao Hong, De-Hao Chen, Yu-Bei Chen, Wen-Guang Chen, Wei-Min Zheng, Hai-Bo Lin

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Tags: Code generation, Computer science, CUDA, MapReduce, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 480, OpenCL

January 9, 2012 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

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high performance computing on graphics processing units: hgpu.org

Applications

MetaBinG: Using GPUs to Accelerate Metagenomic Sequence Classification

Petaflop biofluidics simulations on a two million-core system

Power-performance comparison of single-task driven many-cores

Real-time massively parallel processing of spectral optical coherence tomography data on graphics processing units

High Precision Integer Multiplication with a GPU Using Strassen’s Algorithm with Multiple FFT Sizes

People detection method using graphics processing units for a mobile robot with an omnidirectional camera

Generating, Optimizing, and Scheduling a Compiler Level Representation of Stream Parallelism

Graphics Processor Unit (GPU) Acceleration of Finite-Difference Frequency-Domain (FDFD) Method

A Hybrid Circular Queue Method for Iterative Stencil Computations on GPUs

Parallelizing Kernel Polynomial Method Applying Graphics Processing Units

Acceleration of AES encryption on CUDA GPU

Providing Source Code Level Portability Between CPU and GPU with MapCG

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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