high performance computing on graphics processing units: hgpu.org

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Whole-function vectorization

Ralf Karrenberg, Sebastian Hack

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Tags: Code generation, Computer science, OpenCL, Programming techniques

May 11, 2011 by hgpu

Gemma in April: A matrix-like parallel programming architecture on OpenCL

Tianji Wu, Di Wu, Yu Wang, Xiaorui Zhang, Hong Luo, Ningyi Xu, Huazhong Yang

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Tags: ATI, ATI Radeon HD 5870, Code generation, Computer science, OpenCL, Programming techniques

May 11, 2011 by hgpu

High performance memetic algorithm particle filter for multiple object tracking on modern GPUs

Raul Cabido, Antonio Montemayor, Juan Pantrigo

Tags: Algorithms, Computer science, Computer vision, CUDA, nVidia, Particle filtering, Video tracking

May 11, 2011 by hgpu

Data-aware scheduling of legacy kernels on heterogeneous platforms with distributed memory

Michela Becchi, Surendra Byna, Srihari Cadambi, Srimat Chakradhar

Tags: Computer science, CUDA, Distributed data structures, Heterogeneous systems, nVidia, Performance, Programming Languages, Sparse matrix, Tesla C870

May 10, 2011 by hgpu

The GPU on the simulation of cellular computing models

Jose Cecilia, Jose Garcia, Gines Guerrero, Miguel Martinez-del-Amor, Mario Perez-Jimenez, Manuel Ujaldon

Tags: Computer science, Membrane computing, nVidia, P systems, SAT, Tesla S2050

May 10, 2011 by hgpu

Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming

Jochen Blom, Tobias Jakobi, Daniel Doppmeier, Sebastian Jaenicke, Jorn Kalinowski, Jens Stoye, Alexander Goesmann

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Tags: Algorithms, Bioinformatics, Biology, CUDA, Next-Generation sequencing, nVidia, Package

May 10, 2011 by hgpu

Fast Parallel Tandem Mass Spectral Library Searching Using GPU Hardware Acceleration

Lydia A. Baumgardner, Avinash K. Shanmugam, Henry Lam, Jimmy K. Eng, Daniel B. Martin

Tags: Biology, Chemistry, CUDA, nVidia, Search, Spectrometry

May 10, 2011 by hgpu

Accelerating image registration of MRI by GPU-based parallel computation

Teng-Yi Huang, Yu-Wei Tang, Shiun-Ying Ju

Tags: Image processing, Image registration, Medicine, MRI

May 10, 2011 by hgpu

Astrophysical particle simulations with large custom GPU clusters on three continents

R. Spurzem, P. Berczik, I. Berentzen, K. Nitadori, T. Hamada, G. Marcus, A. Kugel, R. Männer, J. Fiestas, R. Banerjee, R. Klessen

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Tags: Astrophysics, CUDA, GPU cluster, MPI, N-body simulation, nVidia, Tesla C1060, Tesla C2050

May 10, 2011 by hgpu

Stock trading strategy creation using GP on GPU

Dave McKenney, Tony White

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Tags: Computer science, CUDA, Genetic programming, nVidia

May 10, 2011 by hgpu

Parallel preconditioned conjugate gradient algorithm on GPU

Rudi Helfenstein, Jonas Koko

Tags: Algorithms, Conjugate gradient solver, Mathematics, Sparse matrix

May 10, 2011 by hgpu

Efficient Parallelization of the Stochastic Simulation Algorithm for Chemically Reacting Systems On the Graphics Processing Unit

Hong Li, Linda Petzold

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Tags: Biology, Chemistry, CUDA, nVidia, nVidia GeForce 8800 GTX, Stochastic simulation

May 10, 2011 by hgpu

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

Enhancing Deployment-Time Predictive Model Robustness for Code Analysis and Optimization

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

Scalable Access-Pattern Aware I/O Acceleration and Multi-Tiered Data Management for HPC and AI Workloads

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with Protein Database Search

tdg-benchs: benchmarks used to test the performance of taskgraph

Leveraging the potential of task-based programming with OpenMP task graphs

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

Whole-function vectorization

Gemma in April: A matrix-like parallel programming architecture on OpenCL

High performance memetic algorithm particle filter for multiple object tracking on modern GPUs

Data-aware scheduling of legacy kernels on heterogeneous platforms with distributed memory

The GPU on the simulation of cellular computing models

Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming

Fast Parallel Tandem Mass Spectral Library Searching Using GPU Hardware Acceleration

Accelerating image registration of MRI by GPU-based parallel computation

Astrophysical particle simulations with large custom GPU clusters on three continents

Stock trading strategy creation using GP on GPU

Parallel preconditioned conjugate gradient algorithm on GPU

Efficient Parallelization of the Stochastic Simulation Algorithm for Chemically Reacting Systems On the Graphics Processing Unit

Recent source codes

PROM: an open-source software framework to enhance the robustness and performance of predictive models against such changes during deployment

DeepSpeed: a deep learning optimization library that makes distributed training and inference easy, efficient, and effective

HPX: a C++ Standard Library for Concurrency and Parallelism

TorchQC: Quantum Dynamics and Machine Learning

Matrix multiplication using Tensor Cores in CUDA

CPP Joules: Energy Measurement tool for CPP/CUDA programs

HPC-Coder-v2

Reproducible Study and Performance Analysis of GPU Programming Paradigms: OpenACC vs. CUDA in Key Linear Algebra Computations

SW#SYCL

tdg-benchs: benchmarks used to test the performance of taskgraph

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