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Improving Locality of Unstructured Mesh Algorithms on GPUs

Andras Attila Sulyok, Gabor Daniel Balogh, Istvan Zoltan Reguly, Gihan R. Mudalige

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Tags: Algorithms, Computer science, CUDA, Finite element method, Mathematical Software, nVidia, Performance, Tesla P100

February 15, 2018 by hgpu

MiMatrix: A Massively Distributed Deep Learning Framework on a Petascale High-density Heterogeneous Cluster

Xin Chen, Hua Zhou, Yuxiang Gao, Yu Zhu, Dongyan Wang

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Tags: Algorithms, Computer science, CUDA, Deep learning, GPU cluster, Heterogeneous systems, nVidia, RDMA, Tesla P100

February 9, 2018 by hgpu

Communication Architectures for Scalable GPU-centric Computing Systems

Benjamin Klenk

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Heterogeneous systems, nVidia, Tesla K20, Thesis

January 28, 2018 by hgpu

Fast and Flexible GPU Accelerated Binding Free Energy Calculations within the AMBER Molecular Dynamics Package

Daniel J. Mermelstein, Charles Lin, Gard Nelson, Rachael Kretsch, J. Andrew McCammon, Ross C. Walker

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Tags: Algorithms, Bioinformatics, Biology, CUDA, Molecular dynamics, nVidia, nVidia GeForce GTX 1080 Ti, nVidia GeForce GTX Titan X

January 20, 2018 by hgpu

Evaluation of Machine Learning Fameworks on Finis Terrae II

Andres Gomez Tato

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Tags: Algorithms, Benchmarking, Computer science, CUDA, Deep learning, Machine learning, nVidia, Performance, Tesla K80

January 20, 2018 by hgpu

Extending OmpSs for OpenCL kernel co-execution in heterogeneous systems

B. Perez, E. Stafford, J. L. Bosque, R. Beivide, S. Mateo, X. Teruel, X. Martorell, E. Ayguade

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Tags: Algorithms, Computer science, Heterogeneous systems, nVidia, OmpSs, OpenCL, OpenMP, Tesla K20

December 24, 2017 by hgpu

Accelerated Sparse Matrix Operations in Nonlinear Least Squares Solvers

Lukas Polok

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Tags: Algorithms, Computer science, Differential equations, Factorization, FEM, Finite element method, Linear Algebra, nVidia, nVidia GeForce GTX 680, OpenCL, Partial differential equations, PDEs, Sparse matrix, Tesla K40, Thesis

December 19, 2017 by hgpu

OpenCL-accelerated Point Feature Histogram and Its Application in Railway Track Point Cloud Data Processing

Dongxu Lv, Peijun Wang, Wentao Li, Peng Chen

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Tags: Algorithms, AMD Radeon R7 260, ATI, Computer science, OpenCL

December 19, 2017 by hgpu

Investigating Half Precision Arithmetic to Accelerate Dense Linear System Solvers

Azzam Haidar, Panruo Wu, Stanimire Tomov, Jack Dongarra

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Tags: Algorithms, Artificial intelligence, BLAS, Computer science, Linar Algebra, Mixed precision, Neural networks, nVidia, Tesla P100

December 10, 2017 by hgpu

HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

Nilay Khare, Alind Khare and Farhan Khan

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Tags: Algorithms, Bioinformatics, Biology, BLAST, CUDA, Hadoop, nVidia, nVidia Quadro 2000, nVidia Quadro 600, Tesla C2075

December 3, 2017 by hgpu

A Hybrid-parallel Architecture for Applications in Bioinformatics

Jan Christian Kassens

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Tags: Algorithms, Bioinformatics, Biology, Computer science, CUDA, FPGA, nVidia, nVidia GeForce GTX 780 Ti, Thesis

December 3, 2017 by hgpu

2D Image Convolution using Three Parallel Programming Models on the Xeon Phi

Ashkan Tousimojarad, Wim Vanderbauwhede, W Paul Cockshott

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Tags: Algorithms, Computer science, Intel Xeon Phi, OpenCL, OpenMP, Programming Languages

November 30, 2017 by hgpu

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

SimSYCL: A SYCL Implementation Targeting Development, Debugging, Simulation and Conformance

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

94% on CIFAR-10 in 3.29 Seconds on a Single GPU

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

See all packages

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high performance computing on graphics processing units: hgpu.org

Programming

Improving Locality of Unstructured Mesh Algorithms on GPUs

MiMatrix: A Massively Distributed Deep Learning Framework on a Petascale High-density Heterogeneous Cluster

Communication Architectures for Scalable GPU-centric Computing Systems

Fast and Flexible GPU Accelerated Binding Free Energy Calculations within the AMBER Molecular Dynamics Package

Evaluation of Machine Learning Fameworks on Finis Terrae II

Extending OmpSs for OpenCL kernel co-execution in heterogeneous systems

Accelerated Sparse Matrix Operations in Nonlinear Least Squares Solvers

OpenCL-accelerated Point Feature Histogram and Its Application in Railway Track Point Cloud Data Processing

Investigating Half Precision Arithmetic to Accelerate Dense Linear System Solvers

HCudaBLAST: an implementation of BLAST on Hadoop and Cuda

A Hybrid-parallel Architecture for Applications in Bioinformatics

2D Image Convolution using Three Parallel Programming Models on the Xeon Phi

Recent source codes

SimSYCL: Synchronous, single-threaded, library-only SYCL implementation for debugging and verification

GPU plugin for PySCF

QArray

Celerity: High-level C++ for Accelerator Clusters

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

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