high performance computing on graphics processing units: hgpu.org

Applications

hgpu.org » Applications » Medicine

Real time ultrasound image denoising

F. P. X. de Fontes, G. A. Barroso, P. Coupé, P. Hellier

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Tags: CUDA, Filtering, Image processing, Medicine, nVidia GeForce GTX 280, Ultrasound

October 9, 2011 by hgpu

Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)

W.J. Palenstijna, K.J. Batenburga, J. Sijbersa

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Tags: Biology, Image reconstruction, Medicine, nVidia GeForce GTX 280, nVidia GeForce GTX 480, Tomography

October 8, 2011 by hgpu

Interactive Soft Tissue for Surgical Simulation

Gregory S. Ruthenbeck

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Tags: Algorithms, CUDA, Medicine, nVidia, nVidia GeForce GTX 280, Surgical simulation, Thesis, Virtual reality

October 1, 2011 by hgpu

GPU-Based Acceleration of the MLEM Algorithm for SPECT Parallel Imaging with Attenuation Correction and Compensation for Detector Response

Akos Szlavecz, Gabor Hesz, Tamas Bukki, Bela Kari, Balazs Benyo

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Tags: Algorithms, Computed tomography, CT, CUDA, Medicine, nVidia, nVidia GeForce GTX 480, Tomography, Visualization

September 25, 2011 by hgpu

HHT-based time-frequency analysis method for biomedical signal applications

Chin-Feng Lin, Jin-De Zhu

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Tags: Algorithms, Medicine, Signal processing, Wavelet

September 23, 2011 by hgpu

Acceleration of the speed of tissue characterization algorithm for coronary plaque by employing GPGPU technique

Takanori Koga, Shota Furukawa, Noriaki Suetake, Eiji Uchino

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Tags: Algorithms, CUDA, Medicine, Nearest neighbour, nVidia, Surgical simulation, Tesla C1060

September 22, 2011 by hgpu

Scalable, High Performance Fourier Domain Optical Coherence Tomography: Why FPGAs and Not GPGPUs

Jian Li, Marinko V. Sarunic, Lesley Shannon

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Tags: Algorithms, CUDA, Data acquisition, FPGA, Medicine, nVidia, nVidia GeForce GTX 295, nVidia GeForce GTX 480, Tomography

September 21, 2011 by hgpu

Parallel Medical Image Reconstruction: From Graphics Processors to Grids

Maraike Schellmann, Sergei Gorlatch, Dominik Meilander, Thomas Kosters, Klaus Schafers, Frank Wubbeling, Martin Burger

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Tags: Algorithms, Cell processor, Grid, Image reconstruction, Medicine, PET, PET scanning, Tomography

September 16, 2011 by hgpu

Fast Monte Carlo Simulation for Patient-specific CT/CBCT Imaging Dose Calculation

Xun Jia, Hao Yan, Xuejun Gu, Steve B. Jiang

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Tags: Computed tomography, CT, CUDA, Heterogeneous systems, Medical Physics, Medicine, Monte Carlo simulation, nVidia, Physics, Tesla C2050, Tomography

September 16, 2011 by hgpu

Challenges of medical image processing

Ingrid Scholl, Til Aach, Thomas M. Deserno, Torsten Kuhlen

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Tags: Algorithms, Data mining, Grid, Image processing, Medicine, Review, Virtual reality, Visualization

September 11, 2011 by hgpu

Fast Ultrasound Image Simulation Using the Westervelt Equation

Athanasios Karamalis, Wolfgang Wein, Nassir Navab

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Tags: Finite difference, GLSL, Medicine, nVidia, nVidia GeForce GTX 280, OpenGL, Ultrasound

September 8, 2011 by hgpu

Interactive volumetric lighting simulating scattering and shadowing

Timo Ropinski, Christian Doring, Christof Rezk-Salama

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Tags: 3D Graphics and Realism, Computed tomography, CT, GLSL, Medicine, nVidia, nVidia GeForce GTX 285, OpenGL, Rendering, Tomography, Ultrasound

September 4, 2011 by hgpu

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

gpu_tracker: Python package for tracking and profiling GPU utilization in both desktop and high-performance computing environments

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

LOOPer: A Learned Automatic Code Optimizer For Polyhedral Compilers

OpenMC Monte Carlo Code

Performance Portable Monte Carlo Particle Transport on Intel, NVIDIA, and AMD GPUs

Polygeist: C/C++ frontend for MLIR

Retargeting and Respecializing GPU Workloads for Performance Portability

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

SYCL in the edge: performance and energy evaluation for heterogeneous acceleration

OpenMP5-Offload-OpenMC-Intel-PVC

Distributed OpenMP Offloading of OpenMC on Intel GPU MAX Accelerators

See all packages

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high performance computing on graphics processing units: hgpu.org

Applications

Real time ultrasound image denoising

Performance improvements for iterative electron tomography reconstruction using graphics processing units (GPUs)

Interactive Soft Tissue for Surgical Simulation

GPU-Based Acceleration of the MLEM Algorithm for SPECT Parallel Imaging with Attenuation Correction and Compensation for Detector Response

HHT-based time-frequency analysis method for biomedical signal applications

Acceleration of the speed of tissue characterization algorithm for coronary plaque by employing GPGPU technique

Scalable, High Performance Fourier Domain Optical Coherence Tomography: Why FPGAs and Not GPGPUs

Parallel Medical Image Reconstruction: From Graphics Processors to Grids

Fast Monte Carlo Simulation for Patient-specific CT/CBCT Imaging Dose Calculation

Challenges of medical image processing

Fast Ultrasound Image Simulation Using the Westervelt Equation

Interactive volumetric lighting simulating scattering and shadowing

Recent source codes

QArray

Celerity: High-level C++ for Accelerator Clusters

CIFAR-10 Airbench: 94% on CIFAR-10 in 3.29 second

gpu_tracker: Context manager and CLI that tracks the computational-resource-usage of a code block or shell command, particularly the GPU usage

LOOPer: a polyhedral compiler for expressing fast and portable data parallel algorithms

OpenMC Monte Carlo Code

Polygeist: C/C++ frontend for MLIR

Parallel Gaussian process with kernel approximation in CUDA

Optical flow algorithms for SYCL

OpenMP5-Offload-OpenMC-Intel-PVC

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