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High Performance Computing Image Analysis for Radiotherapy Planning

Zilong Pan

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Tags: Computed tomography, CT, CUDA, Filtering, Medicine, nVidia, Radiotherapy, Tesla C2050, Thesis, Tomography

December 17, 2013 by hgpu

GPU Based Dose Calculation

Dmitry Tsigelnitskiy

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Tags: CUDA, Intel Xeon Phi, Medicine, nVidia, Radiotherapy, Tesla C2050, Tesla K20, Thesis

December 12, 2013 by hgpu

OCT on CUDA: Speeding up the image reconstruction algorithm for an Optical Coherence Tomography system using NVIDIA’s CUDA platform

Amin Meyghani

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Tags: Algorithms, CUDA, Image reconstruction, Medicine, nVidia, nVidia Quadro 2000, Thesis, Tomography

September 11, 2013 by hgpu

A Haptic Device Interface for Medical Simulations using OpenCL

Mattias Machwirth

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Tags: Algorithms, ATI, ATI Radeon HD 5750, ATI Radeon HD 7610 M, ATI Radeon HD 7970, Medicine, OpenCL, Thesis, Ultrasound, Visualization

August 14, 2013 by hgpu

GPU Accelerated Pattern Matching Algorithm for DNA Sequences to Detect Cancer using CUDA

Snehal P. Adey

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Tags: Bioinformatics, Biology, CUDA, Medicine, nVidia, Tesla C2070, Thesis

August 7, 2013 by hgpu

Bone Structure Analysis with GPGPUs

Daniel Kellenberger

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Tags: Algorithms, Medicine, nVidia, nVidia GeForce GTX 670, Tesla K20, Thesis

July 20, 2013 by hgpu

Design Space Exploration of Real-time Bedside and Portable Medical Ultrasound Adaptive Beamformer Acceleration

Junying Chen

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Tags: Algorithms, CUDA, Design space exploration, FPGA, Medicine, nVidia, nVidia GeForce GTX 680, Thesis, Ultrasound

July 12, 2013 by hgpu

Volume Raycasting Performance Using DirectCompute

Hakan Johansson

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Tags: Algorithms, ATI, ATI Radeon HD 5850, Computer science, DirectCompute, DirectX, Medicine, Rendering, Thesis, Tomography

March 18, 2013 by hgpu

Automated and interactive approaches for optimal surface finding based segmentation of medical image data

Shanhui Sun

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Tags: CUDA, Image processing, Medicine, nVidia, Tesla C1060, Thesis, Ultrasound, Visualization

March 14, 2013 by hgpu

Using High Performance Computing to Improve Image Guided Cancer Treatment

Dante Gama Dessavre

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Tags: CUDA, Image processing, Medicine, nVidia, Radiotherapy, Tesla C2050, Thesis

February 18, 2013 by hgpu

GPU-Based Airway Tree Segmentation and Centerline Extraction

Erik Smistad

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Source codes

Tags: Algorithms, Medicine, nVidia, OpenCL, Package, Tesla C2070, Thesis, Tomography

November 18, 2012 by hgpu

Task Performance with List-Mode Data

Luca Caucci

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Tags: Algorithms, Computer science, Data acquisition, Image reconstruction, Medicine, nVidia, nVidia GeForce 9800 GX2, nVidia GeForce GTX 295, Tesla C1060, Tesla C2050, Thesis, Tomography

September 23, 2012 by hgpu

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

DeepCompile: A Compiler-Driven Approach to Optimizing Distributed Deep Learning Training

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

GigaAPI for GPU Parallelization

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

Advances in Semantic Patching for HPC-oriented Refactorings with Coccinelle

DuoReduce: MLIR's benchmark

Hardware-Assisted Software Testing and Debugging for Heterogeneous Computing

See all packages

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high performance computing on graphics processing units: hgpu.org

Theses

High Performance Computing Image Analysis for Radiotherapy Planning

GPU Based Dose Calculation

OCT on CUDA: Speeding up the image reconstruction algorithm for an Optical Coherence Tomography system using NVIDIA’s CUDA platform

A Haptic Device Interface for Medical Simulations using OpenCL

GPU Accelerated Pattern Matching Algorithm for DNA Sequences to Detect Cancer using CUDA

Bone Structure Analysis with GPGPUs

Design Space Exploration of Real-time Bedside and Portable Medical Ultrasound Adaptive Beamformer Acceleration

Volume Raycasting Performance Using DirectCompute

Automated and interactive approaches for optimal surface finding based segmentation of medical image data

Using High Performance Computing to Improve Image Guided Cancer Treatment

GPU-Based Airway Tree Segmentation and Centerline Extraction

Task Performance with List-Mode Data

Recent source codes

PELSI: Power-Efficient Layer-Switched Inference

Ouroboros: Virtualized Queues for dynamic memory management

MSCCL++: A GPU-driven communication stack for scalable AI applications

Benchmark compute shader of Unity against InteropUnityCUDA

Data-efficient LLM Fine-tuning for Code Generation

DeepSpeed is a deep learning optimization library that makes distributed training and inference easy, efficient, and effective.

Large Language Model Powered C-to-CUDA Code Translation: A Novel Auto-Parallelization Framework

GigaAPI: a user-space API that simplifies multi-GPU programming, bridging the gap between the capabilities of parallel GPU systems and the ability of developers to harness their full potential

Coccinelle: a C code transformation engine using SmPL for matches, refactorings, and bug fixing

DuoReduce: MLIR's benchmark

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