high performance computing on graphics processing units: hgpu.org

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Fast 2-D Ultrasound Strain Imaging: The Benefits of Using a GPU

Tim Idzenga, Evghenii Gaburov, Willem Vermin, Jan Menssen, Chris L. de Korte

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Tags: Algorithms, CUDA, Image processing, nVidia, OpenMP, Package, Tesla K20, Ultrasound

February 8, 2014 by hgpu

Parallel implementation of 3D protein structure similarity searches using a GPU and the CUDA

Dariusz Mrozek, Milosz Brozek, Bozena Malysiak-Mrozek

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Tags: Algorithms, Bioinformatics, Biology, CUDA, nVidia, nVidia GeForce GTX 285, nVidia GeForce GTX 560 Ti, Package, Tesla C1060

February 4, 2014 by hgpu

Fast Acceleration of 2D Wave Propagation Simulations Using Modern Computational Accelerators

Wei Wang, Lifan Xu, John Cavazos, Howie H. Huang, Matthew Kay

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Tags: Computer science, CUDA, Intel Xeon Phi, nVidia, OpenACC, OpenCL, Optimization, Package

February 4, 2014 by hgpu

A GPU accelerated algorithm for 3D Delaunay triangulation

Thanh-Tung Cao, Ashwin Nanjappa, Mingcen Gao, Tiow-Seng Tan

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Tags: Algorithms, Computational Geometry, Computer science, CUDA, nVidia, nVidia GeForce GTX 580, Package

January 30, 2014 by hgpu

A Detailed GPU Cache Model Based on Reuse Distance Theory

Cedric Nugteren, Gert-Jan van den Braak, Henk Corporaal, Henri Bal

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Tags: Computer science, CUDA, GPGPU-sim, Hardware Architecture, nVidia, nVidia GeForce GTX 470, Package

January 29, 2014 by hgpu

Autotuning Programs with Algorithmic Choice

Jason Ansel

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Tags: Algorithms, ATI, ATI Radeon HD 6630 M, Computer science, nVidia, OpenCL, Package, Performance, Tesla C2070, Thesis

January 28, 2014 by hgpu

Optimizing Stencil Computations for NVIDIA Kepler GPUs

Naoya Maruyama, Takayuki Aoki

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Tags: Computer science, CUDA, Numerical Analysis, nVidia, Package, Tesla K20, Tesla M2075

January 26, 2014 by hgpu

clpeak – peak performance of your opencl device

Krishnaraj Bhat

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Tags: ATI, Benchmarking, Computer science, nVidia, OpenCL, Package, Performance

January 23, 2014 by hgpu

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

Lorenzo Rovigatti, Petr Sulc, Istvan Z. Reguly, Flavio Romano

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Tags: Computational Physics, CUDA, Molecular dynamics, nVidia, Package, Physics, Soft Condensed Matter, Tesla C2070, Tesla K10, Tesla K20

January 23, 2014 by hgpu

GPU Accelerated Vessel Segmentation Using Laplacian Eigenmaps

Lin Cheng, Hyunsu Cho, Peter A. Yoon

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Tags: CUDA, Image processing, nVidia, Package, Tesla K20

January 17, 2014 by hgpu

VertexAPI2 – A Vertex-Program API for Large Graph Computations on the GPU

Erich Elsen, Vishal Vaidyanathan

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Tags: Algorithms, Computer science, CUDA, Graph theory, nVidia, nVidia GeForce GTX 670, Package

January 16, 2014 by hgpu

Adaptation of an acoustic propagation model to the parallel architecture of a graphics processor

Emanuel Ey

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Tags: Acoustics, Algorithms, Earth and Space Sciences, nVidia, nVidia GeForce GTX 580, OpenCL, Package, Raytracing, Thesis

January 14, 2014 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Packages

Fast 2-D Ultrasound Strain Imaging: The Benefits of Using a GPU

Parallel implementation of 3D protein structure similarity searches using a GPU and the CUDA

Fast Acceleration of 2D Wave Propagation Simulations Using Modern Computational Accelerators

A GPU accelerated algorithm for 3D Delaunay triangulation

A Detailed GPU Cache Model Based on Reuse Distance Theory

Autotuning Programs with Algorithmic Choice

Optimizing Stencil Computations for NVIDIA Kepler GPUs

clpeak – peak performance of your opencl device

A comparison between parallelization approaches in molecular dynamics simulations on GPUs

GPU Accelerated Vessel Segmentation Using Laplacian Eigenmaps

VertexAPI2 – A Vertex-Program API for Large Graph Computations on the GPU

Adaptation of an acoustic propagation model to the parallel architecture of a graphics processor

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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