high performance computing on graphics processing units: hgpu.org

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Fluid-solid coupling on a cluster of GPU graphics cards for seismic wave propagation

Dimitri Komatitsch

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Tags: CUDA, Earth and Space Sciences, Finite element method, Geoscience, nVidia, Package, Seismic modeling, Seismology, Tesla S1070

January 16, 2011 by hgpu

Barra: A Parallel Functional Simulator for GPGPU

Sylvain Collange, Marc Daumas, David Defour, David

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 9800 GX2, Package

January 15, 2011 by hgpu

Practical CFD Simulations on Programmable Graphics Hardware using SMAC

Carlos Eduardo Scheidegger, Joao L.D. Comba, Rudnei D. Da Cunha

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Tags: Cg, Fluid dynamics, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce FX 5900, OpenGL, Package

January 14, 2011 by hgpu

GPU accelerated biochemical network simulation

Yanxiang Zhou, Juliane Liepe, Xia Sheng, Michael P. H. Stumpf, Chris Barnes

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Tags: Bioinformatics, Biology, CUDA, GPU cluster, nVidia, Package, Tesla C2050

January 13, 2011 by hgpu

Performance potential for simulating spin models on GPU

Martin Weigel

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Tags: Computational Physics, CUDA, Disordered Systems and Neural Networks, Heisenberg model, High Energy Physics - Lattice, Ising model, Monte Carlo simulation, nVidia, nVidia GeForce GTX 480, Package, Physics, Statistical Mechanics, Tesla C1060

January 12, 2011 by hgpu

Automated image alignment for 2D gel electrophoresis in a high-throughput proteomics pipeline

Andrew W. Dowsey, Michael J. Dunn, Guang-Zhong Z. Yang

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Tags: Bioinformatics, Biology, Cg, Image alignment, nVidia, nVidia GeForce 6800 Ultra, Package

January 11, 2011 by hgpu

Canny edge detection on NVIDIA CUDA

Yuancheng Luo, Ramani Duraiswami

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Tags: Computer vision, CUDA, Image processing, nVidia, nVidia GeForce 8800 GTX, Package

January 10, 2011 by hgpu

Tapping the supercomputer under your desk: solving dynamic equilibrium models with graphics processors?

Eric M. Aldrich, Jesus Fernandez-Villaverde, A. Ronald Gallant, Juan F. Rubio-Ramirez

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Tags: CUDA, Finance, nVidia, nVidia GeForce GTX 280, Package, Tesla C1060

January 9, 2011 by hgpu

CBESW: sequence alignment on the Playstation 3

Adrianto Wirawan, Chee Keong K. Kwoh, Nim Tri T. Hieu, Bertil Schmidt

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Tags: Algorithms, Bioinformatics, Biology, BLAST, Cell processor, CUDA, nVidia, nVidia GeForce 8800 GTX, Package, Playstation, Sequence alignment, Smith-Waterman algorithm

January 8, 2011 by hgpu

JCUDA: A Programmer-Friendly Interface for Accelerating Java Programs with CUDA

Yonghong Yan, Max Grossman, Vivek Sarkar

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Tags: Computer science, CUDA, Java, nVidia, Package, Tesla C1060

January 7, 2011 by hgpu

q-state Potts model metastability study using optimized GPU-based Monte Carlo algorithms

Ezequiel E. Ferrero, Juan Pablo De Francesco, Nicolas Wolovick, Sergio A. Cannas

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Tags: Computational Physics, CUDA, Monte Carlo simulation, nVidia, nVidia GeForce GTX 280, nVidia GeForce GTX 470, nVidia GeForce GTX 480, Package, Physics, Statistical Mechanics

January 6, 2011 by hgpu

A hardware-aware debugger for the OpenGL shading language

Magnus Strengert, Thomas Klein, Thomas Ertl

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Tags: Computer science, GLSL, High-level Languages, nVidia, OpenGL, Package, Programming techniques

January 3, 2011 by hgpu

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

Profile Util library: A quick and easy way to get MPI, OpenMP and GPU runtime information

MaC: Mamba CPU performance predictor

MambaCPU: Enhanced Correlation Mining with State Space Models for CPU Performance Prediction

Mixed-precision finite element kernels

Mixed-precision finite element kernels and assembly: Rounding error analysis and hardware acceleration

SHMT: The Simultaneous and Heterogenous Multithreading project

General-Purpose Computing on Tensor Processors

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

Online Energy Optimization in GPUs: A Multi-Armed Bandit Approach

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high performance computing on graphics processing units: hgpu.org

Packages

Fluid-solid coupling on a cluster of GPU graphics cards for seismic wave propagation

Barra: A Parallel Functional Simulator for GPGPU

Practical CFD Simulations on Programmable Graphics Hardware using SMAC

GPU accelerated biochemical network simulation

Performance potential for simulating spin models on GPU

Automated image alignment for 2D gel electrophoresis in a high-throughput proteomics pipeline

Canny edge detection on NVIDIA CUDA

Tapping the supercomputer under your desk: solving dynamic equilibrium models with graphics processors?

CBESW: sequence alignment on the Playstation 3

JCUDA: A Programmer-Friendly Interface for Accelerating Java Programs with CUDA

q-state Potts model metastability study using optimized GPU-based Monte Carlo algorithms

A hardware-aware debugger for the OpenGL shading language

Recent source codes

Kokkidio: Kokkos+Eigen - write fast, readable multi-platform code

LLaMA-Inference-Bench

MATAR

Over-synchronization in GPU Programs

profile_util: simple C++ library to report memory, timing, thread affinity

MaC: Mamba CPU performance predictor

Mixed-precision finite element kernels

SHMT: The Simultaneous and Heterogenous Multithreading project

Superpipeline: A Universal Approach for Reducing GPU Memory Usage in Large Models

EnergyUCB-Bandit

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