high performance computing on graphics processing units: hgpu.org

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Message passing for GPGPU clusters: CudaMPI

Orion S. Lawlor

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Tags: Computer science, CUDA, GPU cluster, nVidia, nVidia GeForce GTX 280, OpenMPI, Package

January 18, 2011 by hgpu

An exploration of CUDA and CBEA for a gravitational wave data-analysis application (Einstein@Home)

Jens Breitbart, Gaurav Khanna

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Tags: Computational Physics, CUDA, General Relativity and Quantum Cosmology, nVidia, nVidia GeForce GTX 280, Package, Physics

January 18, 2011 by hgpu

Highly accelerated simulations of glassy dynamics using GPUs: caveats on limited floating-point precision

Peter H. Colberg, Felix Hofling

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Tags: Computational Physics, CUDA, nVidia, nVidia GeForce 8800 GTX, nVidia GeForce GTX 280, Package, Physics, Soft Condensed Matter

January 18, 2011 by hgpu

Solving dense linear systems on platforms with multiple hardware accelerators

Enrique S. Quintana-Orti, Francisco D. Igual, Enrique S. Quintana-Orti, Robert A. van de Geijn

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Tags: Computer science, CUDA, GPU cluster, Linear Algebra, nVidia, Package, Task scheduling, Tesla S870

January 17, 2011 by hgpu

Using generalized ensemble simulations and Markov state models to identify conformational states

Gregory R. Bowman, Xuhui Huang, Vijay S. Pande

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Tags: CUDA, Molecular dynamics, Molecular modeling, nVidia, Package, Physics, Thermodynamics

January 16, 2011 by hgpu

Daubechies wavelets for high performance electronic structure calculations: The BigDFT project

Luigi Genovese, Brice Videau, Matthieu Ospici, Thierry Deutsch, Stefan Goedecker, Jean-Francois Mehaut

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Tags: Chemistry, Molecular modeling, OpenCL, Package, Physics

January 16, 2011 by hgpu

Fluid-solid coupling on a cluster of GPU graphics cards for seismic wave propagation

Dimitri Komatitsch

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Tags: CUDA, Earth and Space Sciences, Finite element method, Geoscience, nVidia, Package, Seismic modeling, Seismology, Tesla S1070

January 16, 2011 by hgpu

Barra: A Parallel Functional Simulator for GPGPU

Sylvain Collange, Marc Daumas, David Defour, David

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Tags: Computer science, CUDA, nVidia, nVidia GeForce 9800 GX2, Package

January 15, 2011 by hgpu

Practical CFD Simulations on Programmable Graphics Hardware using SMAC

Carlos Eduardo Scheidegger, Joao L.D. Comba, Rudnei D. Da Cunha

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Tags: Cg, Fluid dynamics, Navier-Stokes equations, NSEs, nVidia, nVidia GeForce 6800 Ultra, nVidia GeForce FX 5900, OpenGL, Package

January 14, 2011 by hgpu

GPU accelerated biochemical network simulation

Yanxiang Zhou, Juliane Liepe, Xia Sheng, Michael P. H. Stumpf, Chris Barnes

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Tags: Bioinformatics, Biology, CUDA, GPU cluster, nVidia, Package, Tesla C2050

January 13, 2011 by hgpu

Performance potential for simulating spin models on GPU

Martin Weigel

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Tags: Computational Physics, CUDA, Disordered Systems and Neural Networks, Heisenberg model, High Energy Physics - Lattice, Ising model, Monte Carlo simulation, nVidia, nVidia GeForce GTX 480, Package, Physics, Statistical Mechanics, Tesla C1060

January 12, 2011 by hgpu

Automated image alignment for 2D gel electrophoresis in a high-throughput proteomics pipeline

Andrew W. Dowsey, Michael J. Dunn, Guang-Zhong Z. Yang

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Tags: Bioinformatics, Biology, Cg, Image alignment, nVidia, nVidia GeForce 6800 Ultra, Package

January 11, 2011 by hgpu

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Can Large Language Models Predict Parallel Code Performance?

PELSI: Power-Efficient Layer-Switched Inference

Efficient deep learning inference on end devices

Ouroboros: Virtualized Queues for dynamic memory management

Dynamic Memory Management on GPUs with SYCL

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high performance computing on graphics processing units: hgpu.org

Packages

Message passing for GPGPU clusters: CudaMPI

An exploration of CUDA and CBEA for a gravitational wave data-analysis application (Einstein@Home)

Highly accelerated simulations of glassy dynamics using GPUs: caveats on limited floating-point precision

Solving dense linear systems on platforms with multiple hardware accelerators

Using generalized ensemble simulations and Markov state models to identify conformational states

Daubechies wavelets for high performance electronic structure calculations: The BigDFT project

Fluid-solid coupling on a cluster of GPU graphics cards for seismic wave propagation

Barra: A Parallel Functional Simulator for GPGPU

Practical CFD Simulations on Programmable Graphics Hardware using SMAC

GPU accelerated biochemical network simulation

Performance potential for simulating spin models on GPU

Automated image alignment for 2D gel electrophoresis in a high-throughput proteomics pipeline

Recent source codes

XaaS containers

microSYCL: SYCL micro-benchmarks repository

SYCL Container

CASS: Cuda-Amd aSSembly

Cluser of smartphones for edge computing application using TensorFlow

CFAL-bench

Efficient Graph Embedding at Scale: Optimizing CPU-GPU-SSD Integration

Can Large Language Models Predict Parallel Code Performance?

PELSI: Power-Efficient Layer-Switched Inference

Ouroboros: Virtualized Queues for dynamic memory management

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